Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918245
Identifier: 229918245
GI number: 229918245
Start: 2487795
End: 2488688
Strand: Reverse
Name: 229918245
Synonym: EAT1b_2526
Alternate gene names: NA
Gene position: 2488688-2487795 (Counterclockwise)
Preceding gene: 229918247
Following gene: 229918242
Centisome position: 82.96
GC content: 52.35
Gene sequence:
>894_bases ATGAAAAGAATACCATTTTACATCCCATTCCTACTTGGGGTGCTATTCCTCTCAGGCTGCACGGATGCCGACGTGAGTGT CTCGACGTCGACGTCAACCGAAGAAACAGTGGAAAAGGAACCTTTACAAGAGGAACAAACCACCGAGCCCCCTAAATCTG AAGGTGATGTATTTGAAGGCTATACGAAGATCGAGGTCGATGGCGGCGATCAGTCCGGCACACGGGAGGCGAATGTCGTC GTTGATATCGGCTTTGGCGACCGAGAGTACTGGGCGTTCACGAACGAACACGGTCAACTGGTTCGCGTGATTGCTGATGA GATCATTCTTCAAAACGACGAGACCGAAGACGTCAATTCTTCAGGACGCTATTATGCAGACGAGGCGAAAGTTCCGGGTG TCGAAGACCCGAACCTCGACGAAGGCCATATCATCGCCGATTCACTTGGCGGTGTCTCGAACGCCTATAACATCACGCCA CAAAACAGCGCACTCAACCGTTACGGCGACCAGGCATTCATGGAAGATGTCATCCGGAAGGCTGGCGGGGCGAAAGACTT CGAAGCCATCATCACCTATCCGAACACGACGACTCAGATTCCTTCCCGCTACCAATACACGTATACCGTACGGGGCAATA CGGTCACCGATACGTATGATAACGTGGATCCGGAGGAAGTGAACGAATCGCTCGGGTTGACGGATGATTCCCCTCCTGCA GTGACGACGGAACCAGTCGAGGAACGGGAATTATCCGATATCGACCTTGACGGAAACGGACAAGTGACAATCAAAGAAGC AAAGAACGCCGGATTCGAGATGCCGATCACGCGTGACCATTGGTTGTACAAGTATATGGACGACCGGGACGGTGACGGGA TGGTCGGTGAATAA
Upstream 100 bases:
>100_bases CACATTTTGAGGGAAGACGCTCAAATCTCGTCTTCTTATGCTATCATTATAAGCTACATAGTAAATACGATAGCGTAACT TCGAATAAGGAGCGATATAG
Downstream 100 bases:
>100_bases CCACGATTGACGAGACGTTTCTCAATGAGAGGAACGTCTTTTCGCATACAAAAAACCGCGGTACAAGACCGCGGTTACAT GTTTAGTTCGACATTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKRIPFYIPFLLGVLFLSGCTDADVSVSTSTSTEETVEKEPLQEEQTTEPPKSEGDVFEGYTKIEVDGGDQSGTREANVV VDIGFGDREYWAFTNEHGQLVRVIADEIILQNDETEDVNSSGRYYADEAKVPGVEDPNLDEGHIIADSLGGVSNAYNITP QNSALNRYGDQAFMEDVIRKAGGAKDFEAIITYPNTTTQIPSRYQYTYTVRGNTVTDTYDNVDPEEVNESLGLTDDSPPA VTTEPVEERELSDIDLDGNGQVTIKEAKNAGFEMPITRDHWLYKYMDDRDGDGMVGE
Sequences:
>Translated_297_residues MKRIPFYIPFLLGVLFLSGCTDADVSVSTSTSTEETVEKEPLQEEQTTEPPKSEGDVFEGYTKIEVDGGDQSGTREANVV VDIGFGDREYWAFTNEHGQLVRVIADEIILQNDETEDVNSSGRYYADEAKVPGVEDPNLDEGHIIADSLGGVSNAYNITP QNSALNRYGDQAFMEDVIRKAGGAKDFEAIITYPNTTTQIPSRYQYTYTVRGNTVTDTYDNVDPEEVNESLGLTDDSPPA VTTEPVEERELSDIDLDGNGQVTIKEAKNAGFEMPITRDHWLYKYMDDRDGDGMVGE >Mature_297_residues MKRIPFYIPFLLGVLFLSGCTDADVSVSTSTSTEETVEKEPLQEEQTTEPPKSEGDVFEGYTKIEVDGGDQSGTREANVV VDIGFGDREYWAFTNEHGQLVRVIADEIILQNDETEDVNSSGRYYADEAKVPGVEDPNLDEGHIIADSLGGVSNAYNITP QNSALNRYGDQAFMEDVIRKAGGAKDFEAIITYPNTTTQIPSRYQYTYTVRGNTVTDTYDNVDPEEVNESLGLTDDSPPA VTTEPVEERELSDIDLDGNGQVTIKEAKNAGFEMPITRDHWLYKYMDDRDGDGMVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32874; Mature: 32874
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIPFYIPFLLGVLFLSGCTDADVSVSTSTSTEETVEKEPLQEEQTTEPPKSEGDVFEG CCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHCCCCCCCCCCEECC YTKIEVDGGDQSGTREANVVVDIGFGDREYWAFTNEHGQLVRVIADEIILQNDETEDVNS EEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC SGRYYADEAKVPGVEDPNLDEGHIIADSLGGVSNAYNITPQNSALNRYGDQAFMEDVIRK CCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHCHHHHHHHHHHH AGGAKDFEAIITYPNTTTQIPSRYQYTYTVRGNTVTDTYDNVDPEEVNESLGLTDDSPPA HCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCC VTTEPVEERELSDIDLDGNGQVTIKEAKNAGFEMPITRDHWLYKYMDDRDGDGMVGE CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKRIPFYIPFLLGVLFLSGCTDADVSVSTSTSTEETVEKEPLQEEQTTEPPKSEGDVFEG CCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHCCCCCCCCCCEECC YTKIEVDGGDQSGTREANVVVDIGFGDREYWAFTNEHGQLVRVIADEIILQNDETEDVNS EEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC SGRYYADEAKVPGVEDPNLDEGHIIADSLGGVSNAYNITPQNSALNRYGDQAFMEDVIRK CCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHCHHHHHHHHHHH AGGAKDFEAIITYPNTTTQIPSRYQYTYTVRGNTVTDTYDNVDPEEVNESLGLTDDSPPA HCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCC VTTEPVEERELSDIDLDGNGQVTIKEAKNAGFEMPITRDHWLYKYMDDRDGDGMVGE CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA