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The map label for this gene is yfhF [H]

Identifier: 229918116

GI number: 229918116

Start: 2346457

End: 2347365

Strand: Reverse

Name: yfhF [H]

Synonym: EAT1b_2396

Alternate gene names: 229918116

Gene position: 2347365-2346457 (Counterclockwise)

Preceding gene: 229918129

Following gene: 229918115

Centisome position: 78.25

GC content: 52.15

Gene sequence:

>909_bases
ATGAAAATCGCAATCACCGGTGGAACCGGGCTCATCGGTCAACCACTCGTTCGTGCACTGGCCGACGCCGGACATCAAGT
CGTCGTGTTGACACGTCATCCACGTCCCCGCCATCGCGGTGTGTCGTTTATCGAATGGTTGACACCGAATAGTAAACCAG
AAGAGGAACTCGAGGGAACAGATGCGTTCATTCATTTGGCCGGCGCCTCAATCAACGACGGGCGATGGACCCACAAACAG
AAACAAGCCATCCTTCAAAGTCGAATCGAAGGGACGAAGGAAGTCGTCCGGATCATTCAACAGTTGAAACAAAAGCCACA
GGTCGTCATCAGCGGCTCGGCCATCGGCATATACGGTGAAGATCGTTCCATTACGTATTCCGAAGAAACCCCATTACCGA
CACGAACTAATTTCCTCGGGAATGTCTGCGTCCTCTGGGAACAGGAAGCAGAACCCATTCGTGATTTAGGCGTTCGTCTT
GTGACGATGCGCACCGGCGTCGTCTTATCGAATGATGGCGGTGCCTTCCCATTAATGAAACTCCCCTATCAGTTCGGGGT
CGGTGGTAAAATTGGTTCAGGAGAGCAATGGGTTCCTTGGATTCATTTAGACGACCTCGTCCGCTTGTTCGTGCATGTCA
TCGATACCGATTCTATCGAAGGACCGGTCAACGGTACTGCACCTACACCGGTGACGATGAACGAGTTCGGGAAGACGATT
GCGAACGTGATGCACCGTCCTCACTGGATTCCGGCACCTGCCCCAATGATGGAACTCGTCCTCGGTGAAAAGAGCGTCAT
CGTCCTAGAAGGAGCGAAAGTCGTTCCGACGAAGGCACTTCAACACGGTTTCGAGTTCCGCTATGAAACATTGGAACCGG
CTCTAACACAACTACTACAAGATGCTTAA

Upstream 100 bases:

>100_bases
AACGTAGAGGATTTTTGATAAGTTAGAAGAAAGGGTATTCATCTGGATATACTGACTTATACCCATTTTAGAAACAACAC
ATGATATCGGAGGGAATTTC

Downstream 100 bases:

>100_bases
GGAGAATGAATTGTGAGTCACTTACTAATCCGAAATGCCCATATTTATCCAATCACTGCCCCCCACTTTTACGGAGACCT
CCGTGTTCGGGACGGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKIAITGGTGLIGQPLVRALADAGHQVVVLTRHPRPRHRGVSFIEWLTPNSKPEEELEGTDAFIHLAGASINDGRWTHKQ
KQAILQSRIEGTKEVVRIIQQLKQKPQVVISGSAIGIYGEDRSITYSEETPLPTRTNFLGNVCVLWEQEAEPIRDLGVRL
VTMRTGVVLSNDGGAFPLMKLPYQFGVGGKIGSGEQWVPWIHLDDLVRLFVHVIDTDSIEGPVNGTAPTPVTMNEFGKTI
ANVMHRPHWIPAPAPMMELVLGEKSVIVLEGAKVVPTKALQHGFEFRYETLEPALTQLLQDA

Sequences:

>Translated_302_residues
MKIAITGGTGLIGQPLVRALADAGHQVVVLTRHPRPRHRGVSFIEWLTPNSKPEEELEGTDAFIHLAGASINDGRWTHKQ
KQAILQSRIEGTKEVVRIIQQLKQKPQVVISGSAIGIYGEDRSITYSEETPLPTRTNFLGNVCVLWEQEAEPIRDLGVRL
VTMRTGVVLSNDGGAFPLMKLPYQFGVGGKIGSGEQWVPWIHLDDLVRLFVHVIDTDSIEGPVNGTAPTPVTMNEFGKTI
ANVMHRPHWIPAPAPMMELVLGEKSVIVLEGAKVVPTKALQHGFEFRYETLEPALTQLLQDA
>Mature_302_residues
MKIAITGGTGLIGQPLVRALADAGHQVVVLTRHPRPRHRGVSFIEWLTPNSKPEEELEGTDAFIHLAGASINDGRWTHKQ
KQAILQSRIEGTKEVVRIIQQLKQKPQVVISGSAIGIYGEDRSITYSEETPLPTRTNFLGNVCVLWEQEAEPIRDLGVRL
VTMRTGVVLSNDGGAFPLMKLPYQFGVGGKIGSGEQWVPWIHLDDLVRLFVHVIDTDSIEGPVNGTAPTPVTMNEFGKTI
ANVMHRPHWIPAPAPMMELVLGEKSVIVLEGAKVVPTKALQHGFEFRYETLEPALTQLLQDA

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=302, Percent_Identity=32.1192052980132, Blast_Score=174, Evalue=9e-44,
Organism=Escherichia coli, GI1788642, Length=300, Percent_Identity=39, Blast_Score=215, Evalue=2e-57,
Organism=Drosophila melanogaster, GI28573846, Length=301, Percent_Identity=34.21926910299, Blast_Score=161, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33259; Mature: 33259

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAITGGTGLIGQPLVRALADAGHQVVVLTRHPRPRHRGVSFIEWLTPNSKPEEELEGT
CEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCC
DAFIHLAGASINDGRWTHKQKQAILQSRIEGTKEVVRIIQQLKQKPQVVISGSAIGIYGE
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEC
DRSITYSEETPLPTRTNFLGNVCVLWEQEAEPIRDLGVRLVTMRTGVVLSNDGGAFPLMK
CCEEEECCCCCCCCCHHCCCCEEEEECCCCCHHHHHCEEEEEEEECEEEECCCCCCCHHH
LPYQFGVGGKIGSGEQWVPWIHLDDLVRLFVHVIDTDSIEGPVNGTAPTPVTMNEFGKTI
CCHHHCCCCCCCCCCCEECEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
ANVMHRPHWIPAPAPMMELVLGEKSVIVLEGAKVVPTKALQHGFEFRYETLEPALTQLLQ
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
DA
CC
>Mature Secondary Structure
MKIAITGGTGLIGQPLVRALADAGHQVVVLTRHPRPRHRGVSFIEWLTPNSKPEEELEGT
CEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCC
DAFIHLAGASINDGRWTHKQKQAILQSRIEGTKEVVRIIQQLKQKPQVVISGSAIGIYGE
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEC
DRSITYSEETPLPTRTNFLGNVCVLWEQEAEPIRDLGVRLVTMRTGVVLSNDGGAFPLMK
CCEEEECCCCCCCCCHHCCCCEEEEECCCCCHHHHHCEEEEEEEECEEEECCCCCCCHHH
LPYQFGVGGKIGSGEQWVPWIHLDDLVRLFVHVIDTDSIEGPVNGTAPTPVTMNEFGKTI
CCHHHCCCCCCCCCCCEECEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
ANVMHRPHWIPAPAPMMELVLGEKSVIVLEGAKVVPTKALQHGFEFRYETLEPALTQLLQ
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]