Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918115
Identifier: 229918115
GI number: 229918115
Start: 2345290
End: 2346444
Strand: Reverse
Name: 229918115
Synonym: EAT1b_2395
Alternate gene names: NA
Gene position: 2346444-2345290 (Counterclockwise)
Preceding gene: 229918116
Following gene: 229918114
Centisome position: 78.22
GC content: 51.52
Gene sequence:
>1155_bases GTGAGTCACTTACTAATCCGAAATGCCCATATTTATCCAATCACTGCCCCCCACTTTTACGGAGACCTCCGTGTTCGGGA CGGGAAAATCGTCGAAATGTCCGATTTACTTGAACCGACTGACGGGGAGCATGTCATTGAAGCTGAAGGAAACTTTTTAT TCCCCGGCTTCATCGATGCTCACACCCACCTCGGATTATATGATGAAGGAACCGGCTCTGTCGGAAACGACGCCAATGAA ACGGTCGAAGCGATGACGCCTCATGCTCGTGCGATCGACGGGGTATACCCCCTTGACGAAGGATTTCAAGAAGCGCTGAT GGCAGGCGTGACCGCCGTTCAGGTCATGCCGGGAAGTATGAACGTCATCGGTGGTGTGACCAGTGTCATCAAAACACACG GTCGCTATATTGACGACATGATCGTCCGTCGTTATGCAGGACTGAAGATGGCACTCGGCGAAAACCCGAAACGGATTCAT AGTATGGGAAAAACCGGTGATTTAACGCGGATGGGGATTATGGGGTTACTTCGTGAAGCGTTCCGTACCGTCGGGTCGAC CAAAACGATCGGAACGTTCGGCAGCCAGATGATTCAACTTGCCCTCGACCGAGAGATGCCGATTCGCGTGCATGCACACC GCGCCGACGACATTTTATCTGTCGTTCGTTTTGCCCAAGAGTTTGATCTCGACTATCGCATCGAGCATTGTACAGAAGGT CATCTCGTCGTTGAAAAATTACAAGAACTCGGTGTGAAACATGTCACCGTCGGACCGACGTTTACTCGAAAATCTAAAAT CGAGCTTCAGAACAAGACGTGGGAGACGTATCGCATTCTCCATGAGCACGGCATGATCGTCTCCATCACGACCGACCATC CGTACACGCCGGTCCAATATTTGAACTTGTGCGCCGGACTTGCAGCACGTGAAGGACTGCCTGTCGACATCGCGTTACGC GGAATCACCATCAATCCGGCTGAATCACTAGGTGTCGCCGACCGAATCGGCTCTCTCGAAGTCGGAAAAGATGCCGATTT GGTGCTTTGGAGTCACTTCCCGCTCGACTACTTATCGAAGCCGATTATGACCATTGTGAACGGTGAAGTCGTGTACAAAA CGGACCGTGCTGAAACCCATCATGAGGTCGAGTAA
Upstream 100 bases:
>100_bases CGTTCCGACGAAGGCACTTCAACACGGTTTCGAGTTCCGCTATGAAACATTGGAACCGGCTCTAACACAACTACTACAAG ATGCTTAAGGAGAATGAATT
Downstream 100 bases:
>100_bases TTTTCATTATTTTTCATAAAGGTTTTTACGCATAATTTACTTGCTTTTTTAAAAATACTATATAAAATTATCTTGTAACT TCATAAAGCAGCCAAGGCGG
Product: amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Imidazolonepropionase; Imidazolonepropionase And Related Amidohydrolases; Dihydroorotase; Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase-Like Domain-Containing Protein; Amidohydrolase Protein; Metallo-Dependent Hydrolase; Secreted; N-Acetylglucosamine-6-Phosphate Deacetylase; Amidohodrolase; Imidazolone-5-Propionate Hydrolase; Aminohydrolase
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSHLLIRNAHIYPITAPHFYGDLRVRDGKIVEMSDLLEPTDGEHVIEAEGNFLFPGFIDAHTHLGLYDEGTGSVGNDANE TVEAMTPHARAIDGVYPLDEGFQEALMAGVTAVQVMPGSMNVIGGVTSVIKTHGRYIDDMIVRRYAGLKMALGENPKRIH SMGKTGDLTRMGIMGLLREAFRTVGSTKTIGTFGSQMIQLALDREMPIRVHAHRADDILSVVRFAQEFDLDYRIEHCTEG HLVVEKLQELGVKHVTVGPTFTRKSKIELQNKTWETYRILHEHGMIVSITTDHPYTPVQYLNLCAGLAAREGLPVDIALR GITINPAESLGVADRIGSLEVGKDADLVLWSHFPLDYLSKPIMTIVNGEVVYKTDRAETHHEVE
Sequences:
>Translated_384_residues MSHLLIRNAHIYPITAPHFYGDLRVRDGKIVEMSDLLEPTDGEHVIEAEGNFLFPGFIDAHTHLGLYDEGTGSVGNDANE TVEAMTPHARAIDGVYPLDEGFQEALMAGVTAVQVMPGSMNVIGGVTSVIKTHGRYIDDMIVRRYAGLKMALGENPKRIH SMGKTGDLTRMGIMGLLREAFRTVGSTKTIGTFGSQMIQLALDREMPIRVHAHRADDILSVVRFAQEFDLDYRIEHCTEG HLVVEKLQELGVKHVTVGPTFTRKSKIELQNKTWETYRILHEHGMIVSITTDHPYTPVQYLNLCAGLAAREGLPVDIALR GITINPAESLGVADRIGSLEVGKDADLVLWSHFPLDYLSKPIMTIVNGEVVYKTDRAETHHEVE >Mature_383_residues SHLLIRNAHIYPITAPHFYGDLRVRDGKIVEMSDLLEPTDGEHVIEAEGNFLFPGFIDAHTHLGLYDEGTGSVGNDANET VEAMTPHARAIDGVYPLDEGFQEALMAGVTAVQVMPGSMNVIGGVTSVIKTHGRYIDDMIVRRYAGLKMALGENPKRIHS MGKTGDLTRMGIMGLLREAFRTVGSTKTIGTFGSQMIQLALDREMPIRVHAHRADDILSVVRFAQEFDLDYRIEHCTEGH LVVEKLQELGVKHVTVGPTFTRKSKIELQNKTWETYRILHEHGMIVSITTDHPYTPVQYLNLCAGLAAREGLPVDIALRG ITINPAESLGVADRIGSLEVGKDADLVLWSHFPLDYLSKPIMTIVNGEVVYKTDRAETHHEVE
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42553; Mature: 42422
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLLIRNAHIYPITAPHFYGDLRVRDGKIVEMSDLLEPTDGEHVIEAEGNFLFPGFIDA CCCEEEECCEEEEEECCCEECCEEECCCCEEEHHHCCCCCCCCEEEEECCCEECCCEECC HTHLGLYDEGTGSVGNDANETVEAMTPHARAIDGVYPLDEGFQEALMAGVTAVQVMPGSM CCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCC NVIGGVTSVIKTHGRYIDDMIVRRYAGLKMALGENPKRIHSMGKTGDLTRMGIMGLLREA HHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHH FRTVGSTKTIGTFGSQMIQLALDREMPIRVHAHRADDILSVVRFAQEFDLDYRIEHCTEG HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCC HLVVEKLQELGVKHVTVGPTFTRKSKIELQNKTWETYRILHEHGMIVSITTDHPYTPVQY HHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCCHHHH LNLCAGLAAREGLPVDIALRGITINPAESLGVADRIGSLEVGKDADLVLWSHFPLDYLSK HHHHHHHHHCCCCCEEEEEEEEEECCHHHCCHHHHCCCEECCCCCCEEEEECCCHHHHCC PIMTIVNGEVVYKTDRAETHHEVE CCEEEECCEEEEEECCCCCCCCCC >Mature Secondary Structure SHLLIRNAHIYPITAPHFYGDLRVRDGKIVEMSDLLEPTDGEHVIEAEGNFLFPGFIDA CCEEEECCEEEEEECCCEECCEEECCCCEEEHHHCCCCCCCCEEEEECCCEECCCEECC HTHLGLYDEGTGSVGNDANETVEAMTPHARAIDGVYPLDEGFQEALMAGVTAVQVMPGSM CCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCC NVIGGVTSVIKTHGRYIDDMIVRRYAGLKMALGENPKRIHSMGKTGDLTRMGIMGLLREA HHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHH FRTVGSTKTIGTFGSQMIQLALDREMPIRVHAHRADDILSVVRFAQEFDLDYRIEHCTEG HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCC HLVVEKLQELGVKHVTVGPTFTRKSKIELQNKTWETYRILHEHGMIVSITTDHPYTPVQY HHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCCHHHH LNLCAGLAAREGLPVDIALRGITINPAESLGVADRIGSLEVGKDADLVLWSHFPLDYLSK HHHHHHHHHCCCCCEEEEEEEEEECCHHHCCHHHHCCCEECCCCCCEEEEECCCHHHHCC PIMTIVNGEVVYKTDRAETHHEVE CCEEEECCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA