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The map label for this gene is 229918129

Identifier: 229918129

GI number: 229918129

Start: 2360488

End: 2361213

Strand: Reverse

Name: 229918129

Synonym: EAT1b_2409

Alternate gene names: NA

Gene position: 2361213-2360488 (Counterclockwise)

Preceding gene: 229918130

Following gene: 229918116

Centisome position: 78.71

GC content: 43.39

Gene sequence:

>726_bases
ATGGCTTCACTACTAACAGAATTGTTCGAAGGTATTTTCGTCACCTTGATCAGCATATTCGCACCCATATTTCTCATCCT
CACACTCATCATCATCTATAAGGTCAAACGTTATCAAAACAGTCAATATTCTCAACAAACTCGACATTCTTACTTCAAAG
TGGTTCAAGACACCGGTCTATTCGGAGAGTATTTATGTGTGGCGGAGATTGAGTCAAAGTTCTTTCAACCGTTGATTCTG
ACAAACCTGTATCTCCCCCATCCTTCTAAAAAAGATCGAACCACTGAGATCGATGTCATTCTGATCAACCAATCCGGGGT
ACATGTCATCGAATCTAAAAACTATAGCGGTTGGATATTCGGTCGGGCACGTGACCAATACTGGACACAGACACTCCCTC
GCCGTAAAAAGCATCGTTTCTTCAATCCGATCAAACAAAATGAATTACATCTCAAAGCCATCGAGCAAGTGCTTGGAGTG
GACCGAACCCATCTCCACTCATGGATTGTGTTCAGCAATCGTTCGACGCTCAAACAAATCGAATCTGCCGAGGTCCCTGT
GCTCAATCGCCAACAGTGGATCAAAGAGCTGATCACCTACCAAGACTTTGTTTTCGATCTCGATGAGCAAGTCCGCCTGT
ACGAAATCTTACACTCCTTCACACAAGTTGACACGACTGTCACCTTGAAACATATCGAAGACATCAAATCGACAATCAAG
CAGTAA

Upstream 100 bases:

>100_bases
TGGGTCCTTTATGATGTAAAAAACGATTATCCTCGATTGTAAAAAATATACATATGAATCATCTCGCTTCTTGTATAGTG
GATACAAAGGGAGGGATTTG

Downstream 100 bases:

>100_bases
ACAAACATCCCCGTACTCATGATGAGCGCGGGGATGTTTCGTCATTTACTCTGCATTTTAAAGCGTAAATACAATTCATT
ATAGTAAGCGTTCATGCGCT

Product: NERD domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MASLLTELFEGIFVTLISIFAPIFLILTLIIIYKVKRYQNSQYSQQTRHSYFKVVQDTGLFGEYLCVAEIESKFFQPLIL
TNLYLPHPSKKDRTTEIDVILINQSGVHVIESKNYSGWIFGRARDQYWTQTLPRRKKHRFFNPIKQNELHLKAIEQVLGV
DRTHLHSWIVFSNRSTLKQIESAEVPVLNRQQWIKELITYQDFVFDLDEQVRLYEILHSFTQVDTTVTLKHIEDIKSTIK
Q

Sequences:

>Translated_241_residues
MASLLTELFEGIFVTLISIFAPIFLILTLIIIYKVKRYQNSQYSQQTRHSYFKVVQDTGLFGEYLCVAEIESKFFQPLIL
TNLYLPHPSKKDRTTEIDVILINQSGVHVIESKNYSGWIFGRARDQYWTQTLPRRKKHRFFNPIKQNELHLKAIEQVLGV
DRTHLHSWIVFSNRSTLKQIESAEVPVLNRQQWIKELITYQDFVFDLDEQVRLYEILHSFTQVDTTVTLKHIEDIKSTIK
Q
>Mature_240_residues
ASLLTELFEGIFVTLISIFAPIFLILTLIIIYKVKRYQNSQYSQQTRHSYFKVVQDTGLFGEYLCVAEIESKFFQPLILT
NLYLPHPSKKDRTTEIDVILINQSGVHVIESKNYSGWIFGRARDQYWTQTLPRRKKHRFFNPIKQNELHLKAIEQVLGVD
RTHLHSWIVFSNRSTLKQIESAEVPVLNRQQWIKELITYQDFVFDLDEQVRLYEILHSFTQVDTTVTLKHIEDIKSTIKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 NERD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011528 [H]

Pfam domain/function: PF08378 NERD [H]

EC number: NA

Molecular weight: Translated: 28478; Mature: 28347

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLLTELFEGIFVTLISIFAPIFLILTLIIIYKVKRYQNSQYSQQTRHSYFKVVQDTGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
FGEYLCVAEIESKFFQPLILTNLYLPHPSKKDRTTEIDVILINQSGVHVIESKNYSGWIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEE
GRARDQYWTQTLPRRKKHRFFNPIKQNELHLKAIEQVLGVDRTHLHSWIVFSNRSTLKQI
ECCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCHHHHHHEEEECCCHHHHHH
ESAEVPVLNRQQWIKELITYQDFVFDLDEQVRLYEILHSFTQVDTTVTLKHIEDIKSTIK
HHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q
C
>Mature Secondary Structure 
ASLLTELFEGIFVTLISIFAPIFLILTLIIIYKVKRYQNSQYSQQTRHSYFKVVQDTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
FGEYLCVAEIESKFFQPLILTNLYLPHPSKKDRTTEIDVILINQSGVHVIESKNYSGWIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEE
GRARDQYWTQTLPRRKKHRFFNPIKQNELHLKAIEQVLGVDRTHLHSWIVFSNRSTLKQI
ECCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCHHHHHHEEEECCCHHHHHH
ESAEVPVLNRQQWIKELITYQDFVFDLDEQVRLYEILHSFTQVDTTVTLKHIEDIKSTIK
HHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10515943; 12004073 [H]