Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917693
Identifier: 229917693
GI number: 229917693
Start: 1928130
End: 1928921
Strand: Reverse
Name: 229917693
Synonym: EAT1b_1970
Alternate gene names: NA
Gene position: 1928921-1928130 (Counterclockwise)
Preceding gene: 229917694
Following gene: 229917692
Centisome position: 64.3
GC content: 45.08
Gene sequence:
>792_bases ATGAAACGATATGCGAAACTGTATTGGCTCTATGCCAAAAATCATTTCAAAGTGATGATGGAATATCGGATGGACTTCTT GATTGGTGTGTTATCGGTCTTCGGTCAACAATTTGCCGCGCTCTTCTTTTTATCGATCGTCTTCCAACACATCGAATCGC TGAACGGTTGGGGATTTTACGAGATTTTGTTCATCTATGGCATCGCGTTTTTAGGTCGAGCCGTCCATCATATCTTTTTT GATAATCTTTGGACAATCGGCTGGCAATATATTCGTACAGGGAACTTGGACCGCATTCTCATGCGTCCTTTAAACCCGTT GTTCCAAATTGTCGCCGAACGGGTACAACAAGACGGATTTGGTCAACTCTTGATTGGGGGGAGCGTGCTCTGGCTCGCCT CGAATGAGCTCGGAATGACATGGAGTATGATGGATATCCTAGTCCTACTCATCATGGTCCTCGCGAGTGGAATGATTTAT ATCGCGGTGAACCTATTCTTTGCGACGTTCTCGTTTTGGATGATTGATAGTCTACCGGTCGTGTTCGCTGTATTCAGCTT GAGTGATTTTGCTCGATATCCGATGACCATCTATTCGAAGGTCATCATGTTCGTCTTAACGTATATCATCCCGTTCGGCT TTACAGCATTTTATCCGGCGATGTATTTCTTTGAAGGACGTGGATTTACCATGTTTGCATTGGCGACCCCGTTCGTCGCT ATGCTCTCACTCGTCATCGCCTATCGGTTTTGGTTATATGGACTGCGTGCATTCGCAAGTACAGGATCTTAA
Upstream 100 bases:
>100_bases GGTCGTCGATTTTGATTCAACTCGCATGGGTCGGTGCCTTCTTTATTTTTGTAAGACTTCTATTCGCGTATGCGGTTCGG AAAGTGACGGTGTTTGGCGG
Downstream 100 bases:
>100_bases TGGAGGAAGGGTGAGTAGATGAAGATCGTTCAACAGTGGAATCAGGAAGACAGCGACTATATTCGACAGCGACTGATTGA ATATAACGCATCACAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKRYAKLYWLYAKNHFKVMMEYRMDFLIGVLSVFGQQFAALFFLSIVFQHIESLNGWGFYEILFIYGIAFLGRAVHHIFF DNLWTIGWQYIRTGNLDRILMRPLNPLFQIVAERVQQDGFGQLLIGGSVLWLASNELGMTWSMMDILVLLIMVLASGMIY IAVNLFFATFSFWMIDSLPVVFAVFSLSDFARYPMTIYSKVIMFVLTYIIPFGFTAFYPAMYFFEGRGFTMFALATPFVA MLSLVIAYRFWLYGLRAFASTGS
Sequences:
>Translated_263_residues MKRYAKLYWLYAKNHFKVMMEYRMDFLIGVLSVFGQQFAALFFLSIVFQHIESLNGWGFYEILFIYGIAFLGRAVHHIFF DNLWTIGWQYIRTGNLDRILMRPLNPLFQIVAERVQQDGFGQLLIGGSVLWLASNELGMTWSMMDILVLLIMVLASGMIY IAVNLFFATFSFWMIDSLPVVFAVFSLSDFARYPMTIYSKVIMFVLTYIIPFGFTAFYPAMYFFEGRGFTMFALATPFVA MLSLVIAYRFWLYGLRAFASTGS >Mature_263_residues MKRYAKLYWLYAKNHFKVMMEYRMDFLIGVLSVFGQQFAALFFLSIVFQHIESLNGWGFYEILFIYGIAFLGRAVHHIFF DNLWTIGWQYIRTGNLDRILMRPLNPLFQIVAERVQQDGFGQLLIGGSVLWLASNELGMTWSMMDILVLLIMVLASGMIY IAVNLFFATFSFWMIDSLPVVFAVFSLSDFARYPMTIYSKVIMFVLTYIIPFGFTAFYPAMYFFEGRGFTMFALATPFVA MLSLVIAYRFWLYGLRAFASTGS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30545; Mature: 30545
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYAKLYWLYAKNHFKVMMEYRMDFLIGVLSVFGQQFAALFFLSIVFQHIESLNGWGFY CCCHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EILFIYGIAFLGRAVHHIFFDNLWTIGWQYIRTGNLDRILMRPLNPLFQIVAERVQQDGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCC GQLLIGGSVLWLASNELGMTWSMMDILVLLIMVLASGMIYIAVNLFFATFSFWMIDSLPV CEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VFAVFSLSDFARYPMTIYSKVIMFVLTYIIPFGFTAFYPAMYFFEGRGFTMFALATPFVA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHH MLSLVIAYRFWLYGLRAFASTGS HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRYAKLYWLYAKNHFKVMMEYRMDFLIGVLSVFGQQFAALFFLSIVFQHIESLNGWGFY CCCHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EILFIYGIAFLGRAVHHIFFDNLWTIGWQYIRTGNLDRILMRPLNPLFQIVAERVQQDGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCC GQLLIGGSVLWLASNELGMTWSMMDILVLLIMVLASGMIYIAVNLFFATFSFWMIDSLPV CEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VFAVFSLSDFARYPMTIYSKVIMFVLTYIIPFGFTAFYPAMYFFEGRGFTMFALATPFVA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHH MLSLVIAYRFWLYGLRAFASTGS HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA