Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917692
Identifier: 229917692
GI number: 229917692
Start: 1927680
End: 1928111
Strand: Reverse
Name: 229917692
Synonym: EAT1b_1969
Alternate gene names: NA
Gene position: 1928111-1927680 (Counterclockwise)
Preceding gene: 229917693
Following gene: 229917686
Centisome position: 64.27
GC content: 43.75
Gene sequence:
>432_bases ATGAAGATCGTTCAACAGTGGAATCAGGAAGACAGCGACTATATTCGACAGCGACTGATTGAATATAACGCATCACAATT ACCTGATGAAGTGAAGCACCCCGTCGAGCATGTAAGTTTTATCGTTCGAGATGACTTCAATCAAATTGTCGGGGGCGTTA CCGGAACGGTGTTTTGGTACACGATGCACATTCATTTCTTATGGGTGGACGAACAGCTTCGAGGAGAGGGATATGGAACA GAGTTGATGATGCGTATCGAACAATTGGCCATCGAGCGCCAATGCCGTCTCATCCAACTCGATACGTTCAGTTTTCAGGC ACCTGACTTTTATACAAAGCTCGGGTATGAAGTTTTCGGAGTGATTGAGTACCACCCGACAGTCAATCATCAGCAATACT ATTTGAAAAAGACTCTTCTCAATCAAAATTAA
Upstream 100 bases:
>100_bases GTTCGTCGCTATGCTCTCACTCGTCATCGCCTATCGGTTTTGGTTATATGGACTGCGTGCATTCGCAAGTACAGGATCTT AATGGAGGAAGGGTGAGTAG
Downstream 100 bases:
>100_bases AACTGCAGACGAGCATACGTCTGCAGTTTCGCTCGAGGCCACGGCTTCGAGTTTTTATTTTGTCGCCGCTTCCGTTAAGA ATGGCACGATTTGCTTCTTA
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Blasticidin-S Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase; Pantoate-Beta-Alanine Ligase; Gcn5-Related N-Acetyltransferase; RepC-Like Protein; Histone Acetyltransferase HPA2-Like Protein; Blasticidin S-Acetyltransferase
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKIVQQWNQEDSDYIRQRLIEYNASQLPDEVKHPVEHVSFIVRDDFNQIVGGVTGTVFWYTMHIHFLWVDEQLRGEGYGT ELMMRIEQLAIERQCRLIQLDTFSFQAPDFYTKLGYEVFGVIEYHPTVNHQQYYLKKTLLNQN
Sequences:
>Translated_143_residues MKIVQQWNQEDSDYIRQRLIEYNASQLPDEVKHPVEHVSFIVRDDFNQIVGGVTGTVFWYTMHIHFLWVDEQLRGEGYGT ELMMRIEQLAIERQCRLIQLDTFSFQAPDFYTKLGYEVFGVIEYHPTVNHQQYYLKKTLLNQN >Mature_143_residues MKIVQQWNQEDSDYIRQRLIEYNASQLPDEVKHPVEHVSFIVRDDFNQIVGGVTGTVFWYTMHIHFLWVDEQLRGEGYGT ELMMRIEQLAIERQCRLIQLDTFSFQAPDFYTKLGYEVFGVIEYHPTVNHQQYYLKKTLLNQN
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17122; Mature: 17122
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVQQWNQEDSDYIRQRLIEYNASQLPDEVKHPVEHVSFIVRDDFNQIVGGVTGTVFWY CCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEE TMHIHFLWVDEQLRGEGYGTELMMRIEQLAIERQCRLIQLDTFSFQAPDFYTKLGYEVFG EEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCHHEEE VIEYHPTVNHQQYYLKKTLLNQN EEEECCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKIVQQWNQEDSDYIRQRLIEYNASQLPDEVKHPVEHVSFIVRDDFNQIVGGVTGTVFWY CCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEE TMHIHFLWVDEQLRGEGYGTELMMRIEQLAIERQCRLIQLDTFSFQAPDFYTKLGYEVFG EEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCHHEEE VIEYHPTVNHQQYYLKKTLLNQN EEEECCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA