Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917694

Identifier: 229917694

GI number: 229917694

Start: 1928918

End: 1929712

Strand: Reverse

Name: 229917694

Synonym: EAT1b_1971

Alternate gene names: NA

Gene position: 1929712-1928918 (Counterclockwise)

Preceding gene: 229917695

Following gene: 229917693

Centisome position: 64.33

GC content: 49.18

Gene sequence:

>795_bases
ATGAGGCTTCAAAAGTACGTAGCGCTCGCCGCCTCACAAATTAAAGTCGATATGGCTTATACGGCCTGGTACTGGGCAAG
TATGTTCTCGGTGACGATGCGCCTGTTCATCTTATATTTCTTTTGGCAGGCTGTTTATGAGAATAAGACTGACGTGTCAG
GCATCTCGCTCTCGATGATGTTGACGTATGCGGTGCTTGCGACGATGCTCGATCAATTCCGTGGCGGTGCCGGACGCGAA
CTCGCGCATCTCATCAAACATGGCGGGGTCGCCGTCGAATTACTTCGACCGTATCATTTACTGGATAAATTACTCGCTCA
AGACATCGGAACAAAAACATCGACCTTTTTCCGTTCGACGCTACCGCTTCTTGTCATCGCCATGCTGTTTATCGGCGTTG
ACCCACCGACGTCAATTGAAAGTGCCTTCGCCTTCTCAATCAGTGTCGTGCTCGCGATCCTCCTTGCGACACTGATTGAT
TTGCTCGTTGGGGTGTTGTCCTTTTATACGGTGAACGTGTGGGGACTTTCTGTCTTACAGGAGGCAATCATTACGATTAT
GTCCGGGGCAATCATCCCGCTCACCTTATTCCCGGATTGGTTCCAGACAATCAGCTTGTATTTACCGTTCGCCTCACTCG
TCTATGTGCCAGTTGCCATCTATACAGGTGGGATTGATGCATCTGCTATATGGTCGTCGATTTTGATTCAACTCGCATGG
GTCGGTGCCTTCTTTATTTTTGTAAGACTTCTATTCGCGTATGCGGTTCGGAAAGTGACGGTGTTTGGCGGATGA

Upstream 100 bases:

>100_bases
TCCGTGAAATCGTGAACTGCAATCGAGTGAAAGATTTATCCGTTGTCGTACCGAAAATGGAAACGTTGATTCGAAACTTG
TATCAGCCTGAGGTGAGTGC

Downstream 100 bases:

>100_bases
AACGATATGCGAAACTGTATTGGCTCTATGCCAAAAATCATTTCAAAGTGATGATGGAATATCGGATGGACTTCTTGATT
GGTGTGTTATCGGTCTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Transport System Permease Component; Daunorubicin Resistance Transmembrane Protein; Integral Membrane Protein; ABC Transporter Permease Protein; ABC Transporter Transmembrane Subunit; Transporter Permease Protein; ABC Transporter Permease-Like Protein; ABC-2 Type Transporter; Transmembrane Component Of ABC Transporter; Daunorubicin Resistance ABC Transporter Permease

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRLQKYVALAASQIKVDMAYTAWYWASMFSVTMRLFILYFFWQAVYENKTDVSGISLSMMLTYAVLATMLDQFRGGAGRE
LAHLIKHGGVAVELLRPYHLLDKLLAQDIGTKTSTFFRSTLPLLVIAMLFIGVDPPTSIESAFAFSISVVLAILLATLID
LLVGVLSFYTVNVWGLSVLQEAIITIMSGAIIPLTLFPDWFQTISLYLPFASLVYVPVAIYTGGIDASAIWSSILIQLAW
VGAFFIFVRLLFAYAVRKVTVFGG

Sequences:

>Translated_264_residues
MRLQKYVALAASQIKVDMAYTAWYWASMFSVTMRLFILYFFWQAVYENKTDVSGISLSMMLTYAVLATMLDQFRGGAGRE
LAHLIKHGGVAVELLRPYHLLDKLLAQDIGTKTSTFFRSTLPLLVIAMLFIGVDPPTSIESAFAFSISVVLAILLATLID
LLVGVLSFYTVNVWGLSVLQEAIITIMSGAIIPLTLFPDWFQTISLYLPFASLVYVPVAIYTGGIDASAIWSSILIQLAW
VGAFFIFVRLLFAYAVRKVTVFGG
>Mature_264_residues
MRLQKYVALAASQIKVDMAYTAWYWASMFSVTMRLFILYFFWQAVYENKTDVSGISLSMMLTYAVLATMLDQFRGGAGRE
LAHLIKHGGVAVELLRPYHLLDKLLAQDIGTKTSTFFRSTLPLLVIAMLFIGVDPPTSIESAFAFSISVVLAILLATLID
LLVGVLSFYTVNVWGLSVLQEAIITIMSGAIIPLTLFPDWFQTISLYLPFASLVYVPVAIYTGGIDASAIWSSILIQLAW
VGAFFIFVRLLFAYAVRKVTVFGG

Specific function: Unknown

COG id: COG4587

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29271; Mature: 29271

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQKYVALAASQIKVDMAYTAWYWASMFSVTMRLFILYFFWQAVYENKTDVSGISLSMM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LTYAVLATMLDQFRGGAGRELAHLIKHGGVAVELLRPYHLLDKLLAQDIGTKTSTFFRST
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LPLLVIAMLFIGVDPPTSIESAFAFSISVVLAILLATLIDLLVGVLSFYTVNVWGLSVLQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIITIMSGAIIPLTLFPDWFQTISLYLPFASLVYVPVAIYTGGIDASAIWSSILIQLAW
HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGAFFIFVRLLFAYAVRKVTVFGG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLQKYVALAASQIKVDMAYTAWYWASMFSVTMRLFILYFFWQAVYENKTDVSGISLSMM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LTYAVLATMLDQFRGGAGRELAHLIKHGGVAVELLRPYHLLDKLLAQDIGTKTSTFFRST
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LPLLVIAMLFIGVDPPTSIESAFAFSISVVLAILLATLIDLLVGVLSFYTVNVWGLSVLQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIITIMSGAIIPLTLFPDWFQTISLYLPFASLVYVPVAIYTGGIDASAIWSSILIQLAW
HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGAFFIFVRLLFAYAVRKVTVFGG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA