Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is lutA

Identifier: 229917684

GI number: 229917684

Start: 1921735

End: 1922472

Strand: Reverse

Name: lutA

Synonym: EAT1b_1961

Alternate gene names: 229917684

Gene position: 1922472-1921735 (Counterclockwise)

Preceding gene: 229917686

Following gene: 229917683

Centisome position: 64.08

GC content: 51.36

Gene sequence:

>738_bases
ATGCCGAATGTAGCTTTATTCGTCACTTGTCTATCTGATACGTTGTTTCCATCCGTCGGACAAGCGACAGTCGAATTACT
CGAACATTTAGGATGCGAGGTGACGTTCCCTTTCGAACAGACGTGCTGTGGGCAACCCGCCTACAACAGCGGCTATCATG
AGGAGACAAAAAAGATTGCCAAGCACATGATCGAAACGTTCGAACAGGCAGATGCAGAATATATCGTCGGACCATCGGGG
TCGTGTGTCATGATGATGCGCGACTATCCGCATTTGTTCCAAGATGACCCTGTGTGGCGTCCTCGGGCAGAGGCACATGC
CGCCAAAACGTTTGAGCTGACGCAATTTATCGTTGATGTGCTCGAAGTCACTGATGTCGGTGCCAAGTTTCCCGCCAAAG
CGACCTATCATGCGTCTTGTCATATGACCCGCCTCCTCGGAATCGAAGCGGCTCCCGGAAAGTTGCTCGGAAACGTCGAT
GGACTGACGATGGTCCCCCTCGCGAACGTACATAACTGTTGCGGGTTCGGTGGGACGTTCTCCGTCAAGATGCCAGACGT
GTCGGTGCAGATGGTAGATGAAAAAGTCGATTCCATCTTACAGTCAGGCGCAGAGGTGTTGATCGGAGCGGATGCGTCAT
GTTTGATGAACATCGGCGGACGTCTTCATAAACAGGGACATCCGATTAAAGTGATGCATATTGCCGAAGTCTTGAACGAA
GGAGTGAAGCAAGCATGA

Upstream 100 bases:

>100_bases
CAAATAAATCAGTTTTTCTCCCCATTTTTCTGTCACTTTCCTACGCTTTATGAAATAATGACGTTGAAATCGCTATCATC
AGAAGAAAGAAGGAATGGCT

Downstream 100 bases:

>100_bases
GCATGGGGATTCGATTGGATGAGAAGTTTCAAGATCGACGAAAAGATGGAATTGAAGATGCGTTCATGCGGCAGGCCGTC
AGTTCGGCTCAAAACCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSG
SCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVD
GLTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE
GVKQA

Sequences:

>Translated_245_residues
MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSG
SCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVD
GLTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE
GVKQA
>Mature_244_residues
PNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSGS
CVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDG
LTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNEG
VKQA

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family

Homologues:

Organism=Escherichia coli, GI1786497, Length=236, Percent_Identity=49.5762711864407, Blast_Score=237, Evalue=5e-64,
Organism=Escherichia coli, GI48994913, Length=253, Percent_Identity=22.5296442687747, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUTA_EXISA (C4L0S2)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002886330.1
- GeneID:   7869171
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_1961
- OMA:   GAYFPHR
- HAMAP:   MF_02105
- InterPro:   IPR004017
- InterPro:   IPR022822

Pfam domain/function: PF02754 CCG

EC number: NA

Molecular weight: Translated: 26609; Mature: 26478

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIA
CCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCHHHHHHHH
KHMIETFEQADAEYIVGPSGSCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDV
HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDGLTMVPLANVHNCCGFGGTF
HHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHHCCCCCEE
SVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE
EEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCHHHHCCCCCEEHHHHHHHHHH
GVKQA
HHCCC
>Mature Secondary Structure 
PNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIA
CCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCHHHHHHHH
KHMIETFEQADAEYIVGPSGSCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDV
HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDGLTMVPLANVHNCCGFGGTF
HHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHHCCCCCEE
SVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE
EEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCHHHHCCCCCEEHHHHHHHHHH
GVKQA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA