Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is lutA
Identifier: 229917684
GI number: 229917684
Start: 1921735
End: 1922472
Strand: Reverse
Name: lutA
Synonym: EAT1b_1961
Alternate gene names: 229917684
Gene position: 1922472-1921735 (Counterclockwise)
Preceding gene: 229917686
Following gene: 229917683
Centisome position: 64.08
GC content: 51.36
Gene sequence:
>738_bases ATGCCGAATGTAGCTTTATTCGTCACTTGTCTATCTGATACGTTGTTTCCATCCGTCGGACAAGCGACAGTCGAATTACT CGAACATTTAGGATGCGAGGTGACGTTCCCTTTCGAACAGACGTGCTGTGGGCAACCCGCCTACAACAGCGGCTATCATG AGGAGACAAAAAAGATTGCCAAGCACATGATCGAAACGTTCGAACAGGCAGATGCAGAATATATCGTCGGACCATCGGGG TCGTGTGTCATGATGATGCGCGACTATCCGCATTTGTTCCAAGATGACCCTGTGTGGCGTCCTCGGGCAGAGGCACATGC CGCCAAAACGTTTGAGCTGACGCAATTTATCGTTGATGTGCTCGAAGTCACTGATGTCGGTGCCAAGTTTCCCGCCAAAG CGACCTATCATGCGTCTTGTCATATGACCCGCCTCCTCGGAATCGAAGCGGCTCCCGGAAAGTTGCTCGGAAACGTCGAT GGACTGACGATGGTCCCCCTCGCGAACGTACATAACTGTTGCGGGTTCGGTGGGACGTTCTCCGTCAAGATGCCAGACGT GTCGGTGCAGATGGTAGATGAAAAAGTCGATTCCATCTTACAGTCAGGCGCAGAGGTGTTGATCGGAGCGGATGCGTCAT GTTTGATGAACATCGGCGGACGTCTTCATAAACAGGGACATCCGATTAAAGTGATGCATATTGCCGAAGTCTTGAACGAA GGAGTGAAGCAAGCATGA
Upstream 100 bases:
>100_bases CAAATAAATCAGTTTTTCTCCCCATTTTTCTGTCACTTTCCTACGCTTTATGAAATAATGACGTTGAAATCGCTATCATC AGAAGAAAGAAGGAATGGCT
Downstream 100 bases:
>100_bases GCATGGGGATTCGATTGGATGAGAAGTTTCAAGATCGACGAAAAGATGGAATTGAAGATGCGTTCATGCGGCAGGCCGTC AGTTCGGCTCAAAACCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSG SCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVD GLTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE GVKQA
Sequences:
>Translated_245_residues MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSG SCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVD GLTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE GVKQA >Mature_244_residues PNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIAKHMIETFEQADAEYIVGPSGS CVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDVLEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDG LTMVPLANVHNCCGFGGTFSVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNEG VKQA
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family
Homologues:
Organism=Escherichia coli, GI1786497, Length=236, Percent_Identity=49.5762711864407, Blast_Score=237, Evalue=5e-64, Organism=Escherichia coli, GI48994913, Length=253, Percent_Identity=22.5296442687747, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LUTA_EXISA (C4L0S2)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886330.1 - GeneID: 7869171 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_1961 - OMA: GAYFPHR - HAMAP: MF_02105 - InterPro: IPR004017 - InterPro: IPR022822
Pfam domain/function: PF02754 CCG
EC number: NA
Molecular weight: Translated: 26609; Mature: 26478
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIA CCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCHHHHHHHH KHMIETFEQADAEYIVGPSGSCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDV HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDGLTMVPLANVHNCCGFGGTF HHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHHCCCCCEE SVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE EEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCHHHHCCCCCEEHHHHHHHHHH GVKQA HHCCC >Mature Secondary Structure PNVALFVTCLSDTLFPSVGQATVELLEHLGCEVTFPFEQTCCGQPAYNSGYHEETKKIA CCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCHHHHHHHH KHMIETFEQADAEYIVGPSGSCVMMMRDYPHLFQDDPVWRPRAEAHAAKTFELTQFIVDV HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEVTDVGAKFPAKATYHASCHMTRLLGIEAAPGKLLGNVDGLTMVPLANVHNCCGFGGTF HHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHHCCCCCEE SVKMPDVSVQMVDEKVDSILQSGAEVLIGADASCLMNIGGRLHKQGHPIKVMHIAEVLNE EEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCHHHHCCCCCEEHHHHHHHHHH GVKQA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA