Click here to switch to the map view.

The map label for this gene is lutC

Identifier: 229917682

GI number: 229917682

Start: 1919640

End: 1920332

Strand: Reverse

Name: lutC

Synonym: EAT1b_1959

Alternate gene names: 229917682

Gene position: 1920332-1919640 (Counterclockwise)

Preceding gene: 229917683

Following gene: 229917679

Centisome position: 64.01

GC content: 51.52

Gene sequence:

>693_bases
ATGAATCCTGGTACAATCACAAACCGTGAGGACTTTCTACAACGAATCGCCAAGCAACTCGGTCGTGAGGTCAAGCTCAC
GCCGCCAAAACGGGAATATACACATCGTCCGCAAGATGAGGTGTTGAAAGGCGCGAGTGAAGAAGAGCTGCTCGAGACGT
TCCGCATGGTCGCGACCCGAATCCATACCGATTTGGTGGAATGTGAATCTGCGAAGCTTGATGATACGCTTCGCCTCTTG
ATTGAACGCTATCATGGCGCACGGATTCTCGCAGAAAACGATGAGCGAATTTCCGCTTGGGCACCTACAACAAGTGAGAC
GTTTGATTGGTGGGATTCGTCACAACCCGAAGCGAGTCGAGAGCTTGCCATTCGAGCGGACATCGGCATCACGATTGCGG
ATGCGGCATTTGCGGAAAGTGCGACAATCGTCCAATATGCGATGCCTGGTAGATCACGGACGATCAGTCTGTTACCCCAA
GACCATATTGCGATCATCCCGAAATCTGTCCTTGTTCCACGTATGACGCAAACAGCACAACAACTCGCCACACTCGACCG
AGACGGTCTCCATTCCCCAAACGGTGTCAATTTCATCTCTGGTCCGTCGAACTCGGCCGACATCGAGATGAACCTCATCG
TCGGCGTTCATGGTCCTGTTCGAGTCTCCTATGTGTTGGTACATGATTTATAA

Upstream 100 bases:

>100_bases
AGATTGAGAAAGGGCTACCGGCTTGGACGGACTCGAAAGACTTGCCACAGCCGAACAAACAGACCGTCCGAGATTGGTTC
AAGAAACGGGGGAATGCCTG

Downstream 100 bases:

>100_bases
GTATAGCCCCTCCATCGATATCGATGGAGGGGCTATGTTCATCCTGATACGGTGACGCTCCCATTTGAGCTCGTTAATTT
CACTTCAATCGATCCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNPGTITNREDFLQRIAKQLGREVKLTPPKREYTHRPQDEVLKGASEEELLETFRMVATRIHTDLVECESAKLDDTLRLL
IERYHGARILAENDERISAWAPTTSETFDWWDSSQPEASRELAIRADIGITIADAAFAESATIVQYAMPGRSRTISLLPQ
DHIAIIPKSVLVPRMTQTAQQLATLDRDGLHSPNGVNFISGPSNSADIEMNLIVGVHGPVRVSYVLVHDL

Sequences:

>Translated_230_residues
MNPGTITNREDFLQRIAKQLGREVKLTPPKREYTHRPQDEVLKGASEEELLETFRMVATRIHTDLVECESAKLDDTLRLL
IERYHGARILAENDERISAWAPTTSETFDWWDSSQPEASRELAIRADIGITIADAAFAESATIVQYAMPGRSRTISLLPQ
DHIAIIPKSVLVPRMTQTAQQLATLDRDGLHSPNGVNFISGPSNSADIEMNLIVGVHGPVRVSYVLVHDL
>Mature_230_residues
MNPGTITNREDFLQRIAKQLGREVKLTPPKREYTHRPQDEVLKGASEEELLETFRMVATRIHTDLVECESAKLDDTLRLL
IERYHGARILAENDERISAWAPTTSETFDWWDSSQPEASRELAIRADIGITIADAAFAESATIVQYAMPGRSRTISLLPQ
DHIAIIPKSVLVPRMTQTAQQLATLDRDGLHSPNGVNFISGPSNSADIEMNLIVGVHGPVRVSYVLVHDL

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family

Homologues:

Organism=Escherichia coli, GI87081718, Length=237, Percent_Identity=29.535864978903, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUTC_EXISA (C4L0S0)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002886328.1
- GeneID:   7869169
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_1959
- OMA:   SCVNIIS
- HAMAP:   MF_02104
- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823
- Gene3D:   G3DSA:3.40.50.10420

Pfam domain/function: PF02589 DUF162

EC number: NA

Molecular weight: Translated: 25676; Mature: 25676

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGTITNREDFLQRIAKQLGREVKLTPPKREYTHRPQDEVLKGASEEELLETFRMVATR
CCCCCCCCHHHHHHHHHHHHCCCEECCCCCHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
IHTDLVECESAKLDDTLRLLIERYHGARILAENDERISAWAPTTSETFDWWDSSQPEASR
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
ELAIRADIGITIADAAFAESATIVQYAMPGRSRTISLLPQDHIAIIPKSVLVPRMTQTAQ
CEEEEECCCEEEECHHHHCCCEEEEEECCCCCCEEEECCCCCEEECCHHHHHHHHHHHHH
QLATLDRDGLHSPNGVNFISGPSNSADIEMNLIVGVHGPVRVSYVLVHDL
HHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MNPGTITNREDFLQRIAKQLGREVKLTPPKREYTHRPQDEVLKGASEEELLETFRMVATR
CCCCCCCCHHHHHHHHHHHHCCCEECCCCCHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
IHTDLVECESAKLDDTLRLLIERYHGARILAENDERISAWAPTTSETFDWWDSSQPEASR
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
ELAIRADIGITIADAAFAESATIVQYAMPGRSRTISLLPQDHIAIIPKSVLVPRMTQTAQ
CEEEEECCCEEEECHHHHCCCEEEEEECCCCCCEEEECCCCCEEECCHHHHHHHHHHHHH
QLATLDRDGLHSPNGVNFISGPSNSADIEMNLIVGVHGPVRVSYVLVHDL
HHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA