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The map label for this gene is yohK [H]

Identifier: 229917652

GI number: 229917652

Start: 1888467

End: 1889141

Strand: Reverse

Name: yohK [H]

Synonym: EAT1b_1929

Alternate gene names: 229917652

Gene position: 1889141-1888467 (Counterclockwise)

Preceding gene: 229917653

Following gene: 229917651

Centisome position: 62.97

GC content: 52.15

Gene sequence:

>675_bases
ATGACATACGTTTGGATCGGATTGACGATTCTCGTGTATTCGCTCAGTCGTCGACTTTCCATGAAGTGGGCATCTCCGTT
CACCAATGTCGTCTTCTTAAGTACAGCGATTCTGATTCTCTTGTTACTCGTGACAGGACAGTCCTATGATGCGTATGAAC
CGGCTACCGATCTCATCACCATCTTACTCGGTCCGGCGACTGTCGCCCTCGGGTTACCGCTCTATCGCAACTTACCCGTA
TTACTCGCACGTGCAAAGCGAGCACTGAGCGCGATTGTCATCGGGTCACTTTCCACAATCTTTGTGGCTGTACTTTTCGG
CAAGTTATTTTCGTTCACCGAAAACGTATTGATTGCACTATCGGTCAAATCGGCGACGTCCCCGATTGCCCTTGAATTGG
CTCGACAACTAGAAGGGGATGCAACACTTGCGGCCTCGATCGCCGTTGCCTGCGGTATTTTAGGGGCGATGCTCGGACCG
GTCTTATTGACGTGGATTCGTATGGACGACCCGTTCACGCGTGGACTCACACTAGGCACAATCAGTCACGGGATTGGGAC
CGCTCAGGCGGCAACGGAACATCCGTTGTCCGGCGCAACAGGTGGTGCCGCGATGGGATTAACGGCCATCTTCACCTCGT
TTATCTTGCCGATTCTATATCCGTTCCTCTTTTGA

Upstream 100 bases:

>100_bases
TAAAAGCTGCCGGTATCCCGCTCCTTATCACGTTACTCGCCAGCATGGCGATCGGTATGGTCGTGACGGCGTTTGTTTCC
GGGAAAGAAGGTGAGACATC

Downstream 100 bases:

>100_bases
ACAGGTCGCGTCCATCGATGGGCGCGACTTTTTTGTTTCGACTTCGATTGCGCGTGATAAACTAATGAAGATGAAACTTA
TTAGAGGAGGGCAATCCATG

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTYVWIGLTILVYSLSRRLSMKWASPFTNVVFLSTAILILLLLVTGQSYDAYEPATDLITILLGPATVALGLPLYRNLPV
LLARAKRALSAIVIGSLSTIFVAVLFGKLFSFTENVLIALSVKSATSPIALELARQLEGDATLAASIAVACGILGAMLGP
VLLTWIRMDDPFTRGLTLGTISHGIGTAQAATEHPLSGATGGAAMGLTAIFTSFILPILYPFLF

Sequences:

>Translated_224_residues
MTYVWIGLTILVYSLSRRLSMKWASPFTNVVFLSTAILILLLLVTGQSYDAYEPATDLITILLGPATVALGLPLYRNLPV
LLARAKRALSAIVIGSLSTIFVAVLFGKLFSFTENVLIALSVKSATSPIALELARQLEGDATLAASIAVACGILGAMLGP
VLLTWIRMDDPFTRGLTLGTISHGIGTAQAATEHPLSGATGGAAMGLTAIFTSFILPILYPFLF
>Mature_223_residues
TYVWIGLTILVYSLSRRLSMKWASPFTNVVFLSTAILILLLLVTGQSYDAYEPATDLITILLGPATVALGLPLYRNLPVL
LARAKRALSAIVIGSLSTIFVAVLFGKLFSFTENVLIALSVKSATSPIALELARQLEGDATLAASIAVACGILGAMLGPV
LLTWIRMDDPFTRGLTLGTISHGIGTAQAATEHPLSGATGGAAMGLTAIFTSFILPILYPFLF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=225, Percent_Identity=32.8888888888889, Blast_Score=118, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 23671; Mature: 23540

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVWIGLTILVYSLSRRLSMKWASPFTNVVFLSTAILILLLLVTGQSYDAYEPATDLIT
CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ILLGPATVALGLPLYRNLPVLLARAKRALSAIVIGSLSTIFVAVLFGKLFSFTENVLIAL
HHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
SVKSATSPIALELARQLEGDATLAASIAVACGILGAMLGPVLLTWIRMDDPFTRGLTLGT
EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEHHH
ISHGIGTAQAATEHPLSGATGGAAMGLTAIFTSFILPILYPFLF
HHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYVWIGLTILVYSLSRRLSMKWASPFTNVVFLSTAILILLLLVTGQSYDAYEPATDLIT
EEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ILLGPATVALGLPLYRNLPVLLARAKRALSAIVIGSLSTIFVAVLFGKLFSFTENVLIAL
HHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
SVKSATSPIALELARQLEGDATLAASIAVACGILGAMLGPVLLTWIRMDDPFTRGLTLGT
EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEHHH
ISHGIGTAQAATEHPLSGATGGAAMGLTAIFTSFILPILYPFLF
HHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]