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The map label for this gene is cidA [H]

Identifier: 229917653

GI number: 229917653

Start: 1889138

End: 1889491

Strand: Reverse

Name: cidA [H]

Synonym: EAT1b_1930

Alternate gene names: 229917653

Gene position: 1889491-1889138 (Counterclockwise)

Preceding gene: 229917655

Following gene: 229917652

Centisome position: 62.99

GC content: 49.15

Gene sequence:

>354_bases
ATGAAATTATTAAAATGGATGATTGGGCTCGCTCTTTTATTCGGACTGAGCACACTCGGCAATTGGATGGTCGAAACGTT
CGCTTGGAAAGTACCGGGCAGCGTCATCGGCATGGTACTGTTGCTCATTCTCTTAGTAACAAAAGTCATTCGGGTGGAAT
GGATTGAGGACAGTGCTGGATATTTGACGAAGCATCTCGCCTTCTTCTTCATCCCCATTGCCGTCGGCCTTATGGCGTAC
GGCACTTTGTTAAAAGCTGCCGGTATCCCGCTCCTTATCACGTTACTCGCCAGCATGGCGATCGGTATGGTCGTGACGGC
GTTTGTTTCCGGGAAAGAAGGTGAGACATCATGA

Upstream 100 bases:

>100_bases
ATGTACCCCTTGTCTTTTTTGTTGTACCCTTTTCTTGACCTCTCTCGTTGAATTTGAGAAGATTCATACGTTTTGAATGA
CGTGAAAGGAAGTCATGTAT

Downstream 100 bases:

>100_bases
CATACGTTTGGATCGGATTGACGATTCTCGTGTATTCGCTCAGTCGTCGACTTTCCATGAAGTGGGCATCTCCGTTCACC
AATGTCGTCTTCTTAAGTAC

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKLLKWMIGLALLFGLSTLGNWMVETFAWKVPGSVIGMVLLLILLVTKVIRVEWIEDSAGYLTKHLAFFFIPIAVGLMAY
GTLLKAAGIPLLITLLASMAIGMVVTAFVSGKEGETS

Sequences:

>Translated_117_residues
MKLLKWMIGLALLFGLSTLGNWMVETFAWKVPGSVIGMVLLLILLVTKVIRVEWIEDSAGYLTKHLAFFFIPIAVGLMAY
GTLLKAAGIPLLITLLASMAIGMVVTAFVSGKEGETS
>Mature_117_residues
MKLLKWMIGLALLFGLSTLGNWMVETFAWKVPGSVIGMVLLLILLVTKVIRVEWIEDSAGYLTKHLAFFFIPIAVGLMAY
GTLLKAAGIPLLITLLASMAIGMVVTAFVSGKEGETS

Specific function: Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. W

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CidA/LrgA family. CidA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 12644; Mature: 12644

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKWMIGLALLFGLSTLGNWMVETFAWKVPGSVIGMVLLLILLVTKVIRVEWIEDSAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLTKHLAFFFIPIAVGLMAYGTLLKAAGIPLLITLLASMAIGMVVTAFVSGKEGETS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLLKWMIGLALLFGLSTLGNWMVETFAWKVPGSVIGMVLLLILLVTKVIRVEWIEDSAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLTKHLAFFFIPIAVGLMAYGTLLKAAGIPLLITLLASMAIGMVVTAFVSGKEGETS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA