Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is aroA [H]
Identifier: 229000869
GI number: 229000869
Start: 616159
End: 617493
Strand: Reverse
Name: aroA [H]
Synonym: NATL1_06701
Alternate gene names: 229000869
Gene position: 617493-616159 (Counterclockwise)
Preceding gene: 124025380
Following gene: 124025378
Centisome position: 33.11
GC content: 40.45
Gene sequence:
>1335_bases TTGAAAGCTCCCACTAAAGATCAGTCTTTAAGAAACCTTCAAAAAGGAGGGGAGCTCTATGGAAAAGTGAAAGTACCTGG AGACAAGTCAATCTCACACCGTGCACTACTTTTTGGGGCTATTGCTAAGGGGAAAACACTAATTGAGGGCCTTTTACCTG CTGAAGATCCATTAAGTACTGCTGAATGCCTTAGGTCAATGGGCGTAAAGATTAGTCCAATCAAGAAAGGAGACATTATT GAAATTGAAGGCGTTGGATTAAATGGCCTCCAGGAGCCACAAGATATTTTGAACTGCGGAAATTCAGGAACAACTATGAG ATTAATAATGGGATTATTAGCCGGTCAAAAAGATCATCATTTCATCCTCACAGGCGATAAATCACTTAGAAATAGGCCGA TGAAAAGAGTAGGACAGCCGTTAAAAATGATGGGGGCTAAAGTTTTCGGAAGATGCGGTGGAGACTTGGCTCCTCTATCG ATTATTGGGAATAAATTAAGAGGTGCCGTAATTGGTACACCAGTAGCAAGTGCTCAGATAAAATCTGCAATCCTACTAGC TGCTCTTAATGCAGAAGGCTCAACGACGGTTATTGAACCCGCCAGATCAAGAGATCATAGCGAGAGAATGCTAAAAGCCT TCGGAGCTAATCTAGAGGTTGGTGGAGAGATGGGTAGACATATAACTGTATCCCCTGGTAAAGATCTAAAAGGTCAATCA ATTATTGTTCCTGGAGATATTAGTTCCGCTGCATTTTGGCTCGTTGCAGGTAGCATCATACCCGGATCAGAGTTGGTTGT AGAAAATGTTGGTCTAAATCCAACAAGGACTGGAATACTTGACGTATTAGAAGCAATGGAAGCAAATATCAACGTAATAA ACAAAAGAGATGTAGCCGGTGAACCTGTCGGAGATATTGAAGTTTTCTACAAAGAAAACTTAAAACCATTTAAAATTGAC GATGAGATAATGCCACGGCTTGTTGACGAGATACCCATTTTATCCGTAGGAGCATGTTTTTGTAATGGTATCAGTCAAAT AAAAGGAGCAAGTGAGCTAAGAGTTAAAGAAACTGATCGATTAGCTGTAATGGCAAGGCAATTAAAAAGGATGGGAGCCA GCGTAGATGAGCATCAAGATGGTCTAACTATCTATGGAGGAAAAAGCTTAGAAGGATGCGAACTTGATAGCGAGGATGAT CACCGTATAGCCATGAGTTTAGCTATTGCATCAATAATGGCTAATTCTAATTCGACATTACGACGTAGTGAGGCTGCAGC AATTTCATATCCTGATTTTTGGAGTGATCTTAAGAGACTTCAACAAAAAAATTAG
Upstream 100 bases:
>100_bases TGTTATCGATGAATTAATGCGTCAAAAACAAATAAACAATTCATAAATCAGTAATAAAGCTTATCGAGAAATAAAATATA AAAAAATATATTTTTTTTCA
Downstream 100 bases:
>100_bases CTTTCTGAGAATTGGATGATTATAAAAAACATACGACAAGAGATGGGAGTTTAAGTCTTTATAGCTTGAGCTATAAAGAA GGATTTCATGATAAGGACGG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKAPTKDQSLRNLQKGGELYGKVKVPGDKSISHRALLFGAIAKGKTLIEGLLPAEDPLSTAECLRSMGVKISPIKKGDII EIEGVGLNGLQEPQDILNCGNSGTTMRLIMGLLAGQKDHHFILTGDKSLRNRPMKRVGQPLKMMGAKVFGRCGGDLAPLS IIGNKLRGAVIGTPVASAQIKSAILLAALNAEGSTTVIEPARSRDHSERMLKAFGANLEVGGEMGRHITVSPGKDLKGQS IIVPGDISSAAFWLVAGSIIPGSELVVENVGLNPTRTGILDVLEAMEANINVINKRDVAGEPVGDIEVFYKENLKPFKID DEIMPRLVDEIPILSVGACFCNGISQIKGASELRVKETDRLAVMARQLKRMGASVDEHQDGLTIYGGKSLEGCELDSEDD HRIAMSLAIASIMANSNSTLRRSEAAAISYPDFWSDLKRLQQKN
Sequences:
>Translated_444_residues MKAPTKDQSLRNLQKGGELYGKVKVPGDKSISHRALLFGAIAKGKTLIEGLLPAEDPLSTAECLRSMGVKISPIKKGDII EIEGVGLNGLQEPQDILNCGNSGTTMRLIMGLLAGQKDHHFILTGDKSLRNRPMKRVGQPLKMMGAKVFGRCGGDLAPLS IIGNKLRGAVIGTPVASAQIKSAILLAALNAEGSTTVIEPARSRDHSERMLKAFGANLEVGGEMGRHITVSPGKDLKGQS IIVPGDISSAAFWLVAGSIIPGSELVVENVGLNPTRTGILDVLEAMEANINVINKRDVAGEPVGDIEVFYKENLKPFKID DEIMPRLVDEIPILSVGACFCNGISQIKGASELRVKETDRLAVMARQLKRMGASVDEHQDGLTIYGGKSLEGCELDSEDD HRIAMSLAIASIMANSNSTLRRSEAAAISYPDFWSDLKRLQQKN >Mature_444_residues MKAPTKDQSLRNLQKGGELYGKVKVPGDKSISHRALLFGAIAKGKTLIEGLLPAEDPLSTAECLRSMGVKISPIKKGDII EIEGVGLNGLQEPQDILNCGNSGTTMRLIMGLLAGQKDHHFILTGDKSLRNRPMKRVGQPLKMMGAKVFGRCGGDLAPLS IIGNKLRGAVIGTPVASAQIKSAILLAALNAEGSTTVIEPARSRDHSERMLKAFGANLEVGGEMGRHITVSPGKDLKGQS IIVPGDISSAAFWLVAGSIIPGSELVVENVGLNPTRTGILDVLEAMEANINVINKRDVAGEPVGDIEVFYKENLKPFKID DEIMPRLVDEIPILSVGACFCNGISQIKGASELRVKETDRLAVMARQLKRMGASVDEHQDGLTIYGGKSLEGCELDSEDD HRIAMSLAIASIMANSNSTLRRSEAAAISYPDFWSDLKRLQQKN
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=440, Percent_Identity=29.0909090909091, Blast_Score=135, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320332, Length=462, Percent_Identity=27.0562770562771, Blast_Score=126, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 47576; Mature: 47576
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPTKDQSLRNLQKGGELYGKVKVPGDKSISHRALLFGAIAKGKTLIEGLLPAEDPLST CCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCH AECLRSMGVKISPIKKGDIIEIEGVGLNGLQEPQDILNCGNSGTTMRLIMGLLAGQKDHH HHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCE FILTGDKSLRNRPMKRVGQPLKMMGAKVFGRCGGDLAPLSIIGNKLRGAVIGTPVASAQI EEEECCHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCHHHHH KSAILLAALNAEGSTTVIEPARSRDHSERMLKAFGANLEVGGEMGRHITVSPGKDLKGQS HHEEEEEEECCCCCEEEECCHHCCCHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCCE IIVPGDISSAAFWLVAGSIIPGSELVVENVGLNPTRTGILDVLEAMEANINVINKRDVAG EEECCCCCHHEEEHEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC EPVGDIEVFYKENLKPFKIDDEIMPRLVDEIPILSVGACFCNGISQIKGASELRVKETDR CCCCCEEHHHHCCCCCEECCHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCEECHHHH LAVMARQLKRMGASVDEHQDGLTIYGGKSLEGCELDSEDDHRIAMSLAIASIMANSNSTL HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH RRSEAAAISYPDFWSDLKRLQQKN HHCCCCEECCCHHHHHHHHHHHCC >Mature Secondary Structure MKAPTKDQSLRNLQKGGELYGKVKVPGDKSISHRALLFGAIAKGKTLIEGLLPAEDPLST CCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCH AECLRSMGVKISPIKKGDIIEIEGVGLNGLQEPQDILNCGNSGTTMRLIMGLLAGQKDHH HHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCE FILTGDKSLRNRPMKRVGQPLKMMGAKVFGRCGGDLAPLSIIGNKLRGAVIGTPVASAQI EEEECCHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCHHHHH KSAILLAALNAEGSTTVIEPARSRDHSERMLKAFGANLEVGGEMGRHITVSPGKDLKGQS HHEEEEEEECCCCCEEEECCHHCCCHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCCE IIVPGDISSAAFWLVAGSIIPGSELVVENVGLNPTRTGILDVLEAMEANINVINKRDVAG EEECCCCCHHEEEHEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC EPVGDIEVFYKENLKPFKIDDEIMPRLVDEIPILSVGACFCNGISQIKGASELRVKETDR CCCCCEEHHHHCCCCCEECCHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCEECHHHH LAVMARQLKRMGASVDEHQDGLTIYGGKSLEGCELDSEDDHRIAMSLAIASIMANSNSTL HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH RRSEAAAISYPDFWSDLKRLQQKN HHCCCCEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA