Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025378

Identifier: 124025378

GI number: 124025378

Start: 615251

End: 616147

Strand: Reverse

Name: 124025378

Synonym: NATL1_06691

Alternate gene names: NA

Gene position: 616147-615251 (Counterclockwise)

Preceding gene: 229000869

Following gene: 124025373

Centisome position: 33.04

GC content: 35.45

Gene sequence:

>897_bases
TTGGATGATTATAAAAAACATACGACAAGAGATGGGAGTTTAAGTCTTTATAGCTTGAGCTATAAAGAAGGATTTCATGA
TAAGGACGGAGCCCTCAGAGAATCAATCAATAAATATCTATTACCAGCACAATTGGAAGAAGTTTATAACGCTAAAAAAA
TTGTTGTTTTAGATGTTTGTATGGGCTTAGGATACAACACTGGATGTATTCTCGAAGAGTTACTTCAACGCAATATTAAA
ATCGAATGGCATGGACTTGAGATTGATCAAAAGCCTCTAAATCTTGGTCTTAATGAAAAAATATTTCAAGAAATTTGGTC
TTCAAAAGTATTGCATTTTTTTAATTGCTTAAACATATCGGGGAAATGGACTGAAGGTGTTAACCAAGGAACTATTCACT
GGGGGGATGCGAGACAAAAAATATTCGAAATACAAGATTCTCTTAGGTTTGATTTAATTCTTCTTGATCCCTTTTCTCCA
CAAAAGTGTCCCGAGCTATGGAGTGAGGAGTTCATCTCTTTATTAACCGCAAGGCTATCTACCGAGGGCCGCTTGATTAC
ATATTCAACTGCTGCCTCAATTAGAGCGAGTTTCAAAAGAGCTGGTTTAAACATCTATTCAATAGTTCCATCAACCGATG
ATCAAAGAAAATGGAGTTCAGGGACAGTTGCTATGAAAAAGAAAATTGAACAACAGTTGATTGAAAAAAATTGTCAGATT
AAAGAGCTAAGCACCAAAGAAGTAGAACACCTTGCTACGCGTTCATCAATTCCTTATAGAGATCCAACAGGGAAAGGAAA
CTCTAAAGAAATTATTTCGACAAGAGAAATAGAGCAATCTAAAAGTCAATTAATAAACACTTCATCATGGAGAAAACGAT
GGAATACTGCGCGATAG

Upstream 100 bases:

>100_bases
CTAATTCGACATTACGACGTAGTGAGGCTGCAGCAATTTCATATCCTGATTTTTGGAGTGATCTTAAGAGACTTCAACAA
AAAAATTAGCTTTCTGAGAA

Downstream 100 bases:

>100_bases
CATTAAAGCAATTAGATTTCTAAAAAAATACTCTAATGCTTGCCATCGCAATTTTAGCGGCTGGAAAAGGTACGCGAATG
AAAAGCAAGCTGCCTAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK
IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP
QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI
KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR

Sequences:

>Translated_298_residues
MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK
IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP
QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI
KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR
>Mature_298_residues
MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK
IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP
QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI
KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR

Specific function: Unknown

COG id: COG4121

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008471 [H]

Pfam domain/function: PF05430 DUF752 [H]

EC number: NA

Molecular weight: Translated: 34265; Mature: 34265

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVC
CCCCHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHH
MGLGYNTGCILEELLQRNIKIEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNIS
HHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSPQKCPELWSEEFISLLTARLS
CCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
TEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI
CCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR
ECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
>Mature Secondary Structure
MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVC
CCCCHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHH
MGLGYNTGCILEELLQRNIKIEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNIS
HHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSPQKCPELWSEEFISLLTARLS
CCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
TEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI
CCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR
ECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]