Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025378
Identifier: 124025378
GI number: 124025378
Start: 615251
End: 616147
Strand: Reverse
Name: 124025378
Synonym: NATL1_06691
Alternate gene names: NA
Gene position: 616147-615251 (Counterclockwise)
Preceding gene: 229000869
Following gene: 124025373
Centisome position: 33.04
GC content: 35.45
Gene sequence:
>897_bases TTGGATGATTATAAAAAACATACGACAAGAGATGGGAGTTTAAGTCTTTATAGCTTGAGCTATAAAGAAGGATTTCATGA TAAGGACGGAGCCCTCAGAGAATCAATCAATAAATATCTATTACCAGCACAATTGGAAGAAGTTTATAACGCTAAAAAAA TTGTTGTTTTAGATGTTTGTATGGGCTTAGGATACAACACTGGATGTATTCTCGAAGAGTTACTTCAACGCAATATTAAA ATCGAATGGCATGGACTTGAGATTGATCAAAAGCCTCTAAATCTTGGTCTTAATGAAAAAATATTTCAAGAAATTTGGTC TTCAAAAGTATTGCATTTTTTTAATTGCTTAAACATATCGGGGAAATGGACTGAAGGTGTTAACCAAGGAACTATTCACT GGGGGGATGCGAGACAAAAAATATTCGAAATACAAGATTCTCTTAGGTTTGATTTAATTCTTCTTGATCCCTTTTCTCCA CAAAAGTGTCCCGAGCTATGGAGTGAGGAGTTCATCTCTTTATTAACCGCAAGGCTATCTACCGAGGGCCGCTTGATTAC ATATTCAACTGCTGCCTCAATTAGAGCGAGTTTCAAAAGAGCTGGTTTAAACATCTATTCAATAGTTCCATCAACCGATG ATCAAAGAAAATGGAGTTCAGGGACAGTTGCTATGAAAAAGAAAATTGAACAACAGTTGATTGAAAAAAATTGTCAGATT AAAGAGCTAAGCACCAAAGAAGTAGAACACCTTGCTACGCGTTCATCAATTCCTTATAGAGATCCAACAGGGAAAGGAAA CTCTAAAGAAATTATTTCGACAAGAGAAATAGAGCAATCTAAAAGTCAATTAATAAACACTTCATCATGGAGAAAACGAT GGAATACTGCGCGATAG
Upstream 100 bases:
>100_bases CTAATTCGACATTACGACGTAGTGAGGCTGCAGCAATTTCATATCCTGATTTTTGGAGTGATCTTAAGAGACTTCAACAA AAAAATTAGCTTTCTGAGAA
Downstream 100 bases:
>100_bases CATTAAAGCAATTAGATTTCTAAAAAAATACTCTAATGCTTGCCATCGCAATTTTAGCGGCTGGAAAAGGTACGCGAATG AAAAGCAAGCTGCCTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR
Sequences:
>Translated_298_residues MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR >Mature_298_residues MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVCMGLGYNTGCILEELLQRNIK IEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNISGKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSP QKCPELWSEEFISLLTARLSTEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 34265; Mature: 34265
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVC CCCCHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHH MGLGYNTGCILEELLQRNIKIEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNIS HHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSPQKCPELWSEEFISLLTARLS CCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC TEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI CCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR ECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure MDDYKKHTTRDGSLSLYSLSYKEGFHDKDGALRESINKYLLPAQLEEVYNAKKIVVLDVC CCCCHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHH MGLGYNTGCILEELLQRNIKIEWHGLEIDQKPLNLGLNEKIFQEIWSSKVLHFFNCLNIS HHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GKWTEGVNQGTIHWGDARQKIFEIQDSLRFDLILLDPFSPQKCPELWSEEFISLLTARLS CCCCCCCCCCCEEECHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC TEGRLITYSTAASIRASFKRAGLNIYSIVPSTDDQRKWSSGTVAMKKKIEQQLIEKNCQI CCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE KELSTKEVEHLATRSSIPYRDPTGKGNSKEIISTREIEQSKSQLINTSSWRKRWNTAR ECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]