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The map label for this gene is dapB [H]

Identifier: 228879505

GI number: 228879505

Start: 2146095

End: 2146823

Strand: Direct

Name: dapB [H]

Synonym: ELI_10585

Alternate gene names: 228879505

Gene position: 2146095-2146823 (Clockwise)

Preceding gene: 85374941

Following gene: 85374945

Centisome position: 70.31

GC content: 69.55

Gene sequence:

>729_bases
GTGGCGAGAATAGGCATCATCGGCAGCGCAGGGCGCATGGGCAAGGCGATCGCGGAGGTGCTGGCCGATACCGGCCACGA
TCTCGGCGGCGGGGTCGATGCCGGCGGCGATGTCGCTAGCCTCGCCGACAAGAGCGAAGTGCTGGTCGACTTCTCCGCGC
CGGGCGCGCTGCAGGGCAATCTTCACGCCGCCATCGGCGCAGGCATCCCGCTGGTGATCGGCACAACCGGGCTCGGCGAG
AGCCACCACACCGCGATCAACAACGCCGCACGCGCCGTGCCGATCCTGCAGACGGGCAACACATCGCTCGGCGTCACGCT
GCTGGCGCATCTGGTGCGAGAAGCCGCGAGTAAGCTCGGCCCTGACTGGGATATCGAGATCGTCGAAATGCACCACCGCC
ACAAGGTCGATGCGCCGAGCGGCACGGCCCTGCTGCTCGGCGAAGCGGCGGCGCAGGGGCGTGGTATCGAGCTTGCCGAC
AACACCGAAAGCGGGCGGGACGGCCACACCGTGGAGCGGGCCGAGGGCGCAATCGGCTTCGCCGCGCTGCGTGGCGGCAC
AGTGGCGGGGGAGCACAGCGTCATCCTCGCCGGCGAGCAGGAGCGCCTGACGTTCTCGCACAGCGCCGAGAACCGCCTGA
TCTTCGCTCGCGGTGCGGTGAAGGCGGCGGAGTGGCTGATCGGCAAGCAGGCCGGTCGCTATGCGATGGCGGACGTGCTG
GGGCTCTGA

Upstream 100 bases:

>100_bases
CCGTTCGCCCTGAGCTTGTCGAAGGGCTGTCTTTTCTTCTAGCTCAGGGCATGAAGGAAGTGCGGGGCTTCGACAAGCTC
AGCCCGAACGGGGAAGCGAC

Downstream 100 bases:

>100_bases
GCAAGCTGCCATGACCAAGGACCAGATTTTCGAATTCTTCCGGCGGCTGGCGGAAGACAATCCCGAGCCGGAGACCGAGC
TGGAATATGGCAATTGCTAC

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MARIGIIGSAGRMGKAIAEVLADTGHDLGGGVDAGGDVASLADKSEVLVDFSAPGALQGNLHAAIGAGIPLVIGTTGLGE
SHHTAINNAARAVPILQTGNTSLGVTLLAHLVREAASKLGPDWDIEIVEMHHRHKVDAPSGTALLLGEAAAQGRGIELAD
NTESGRDGHTVERAEGAIGFAALRGGTVAGEHSVILAGEQERLTFSHSAENRLIFARGAVKAAEWLIGKQAGRYAMADVL
GL

Sequences:

>Translated_242_residues
MARIGIIGSAGRMGKAIAEVLADTGHDLGGGVDAGGDVASLADKSEVLVDFSAPGALQGNLHAAIGAGIPLVIGTTGLGE
SHHTAINNAARAVPILQTGNTSLGVTLLAHLVREAASKLGPDWDIEIVEMHHRHKVDAPSGTALLLGEAAAQGRGIELAD
NTESGRDGHTVERAEGAIGFAALRGGTVAGEHSVILAGEQERLTFSHSAENRLIFARGAVKAAEWLIGKQAGRYAMADVL
GL
>Mature_241_residues
ARIGIIGSAGRMGKAIAEVLADTGHDLGGGVDAGGDVASLADKSEVLVDFSAPGALQGNLHAAIGAGIPLVIGTTGLGES
HHTAINNAARAVPILQTGNTSLGVTLLAHLVREAASKLGPDWDIEIVEMHHRHKVDAPSGTALLLGEAAAQGRGIELADN
TESGRDGHTVERAEGAIGFAALRGGTVAGEHSVILAGEQERLTFSHSAENRLIFARGAVKAAEWLIGKQAGRYAMADVLG
L

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=264, Percent_Identity=40.530303030303, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 24614; Mature: 24483

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIGIIGSAGRMGKAIAEVLADTGHDLGGGVDAGGDVASLADKSEVLVDFSAPGALQGN
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCC
LHAAIGAGIPLVIGTTGLGESHHTAINNAARAVPILQTGNTSLGVTLLAHLVREAASKLG
EEEECCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC
PDWDIEIVEMHHRHKVDAPSGTALLLGEAAAQGRGIELADNTESGRDGHTVERAEGAIGF
CCCCEEEEEEHHHCCCCCCCCCEEEEECHHCCCCCEEEECCCCCCCCCCCHHHHCCCEEE
AALRGGTVAGEHSVILAGEQERLTFSHSAENRLIFARGAVKAAEWLIGKQAGRYAMADVL
EEECCCEECCCCEEEEECCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHH
GL
CC
>Mature Secondary Structure 
ARIGIIGSAGRMGKAIAEVLADTGHDLGGGVDAGGDVASLADKSEVLVDFSAPGALQGN
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCC
LHAAIGAGIPLVIGTTGLGESHHTAINNAARAVPILQTGNTSLGVTLLAHLVREAASKLG
EEEECCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC
PDWDIEIVEMHHRHKVDAPSGTALLLGEAAAQGRGIELADNTESGRDGHTVERAEGAIGF
CCCCEEEEEEHHHCCCCCCCCCEEEEECHHCCCCCEEEECCCCCCCCCCCHHHHCCCEEE
AALRGGTVAGEHSVILAGEQERLTFSHSAENRLIFARGAVKAAEWLIGKQAGRYAMADVL
EEECCCEECCCCEEEEECCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHH
GL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA