| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080795
Identifier: 227080795
GI number: 227080795
Start: 606232
End: 607209
Strand: Reverse
Name: 227080795
Synonym: VCM66_0572
Alternate gene names: NA
Gene position: 607209-606232 (Counterclockwise)
Preceding gene: 227080796
Following gene: 227080794
Centisome position: 20.99
GC content: 52.76
Gene sequence:
>978_bases TTGGGGAGAACAATGGATCCCGCATGGCGCTTGGTATCTGCTTGCCATCATCAGCCAATTTGCTCACTTTACCGCTCACG GGGAGGAGAACCAATGAACTACTACGTAGGCATTGATGGCGGCGGTACATCCTGCCGTGCTCGCATTCGTAATCAGCAAG GTGAATGGGTTGGCGAAGCCAAAAGTGGCAGCGCCAACATCATGCTCGGTGTTGAGGTGGCGTTGCGTTCCGTAGTCGAT GCGATCACCCAAGCGGCAGAGCAAGGCGGGTTATCACCAGACGACTTCCCTAGTATGCATGTAGGTCTTGCTTTGGCTGG TGCGGAGCAAAAAGAGGCGTGGCACGCTTTTATGCAGCAAGCGCACCCTTTCGCTTCCATCACGCTTAACACCGATGCTT ATGGCGCTTGTCTTGGCGCGCACCTTGGTGAAGAGGGCGCGATCATGATCGCCGGAACCGGATCGTGTGGCATTTTGCTA AAAGGTGGCAAACAGTACGTGGTTGGCGGTCGTGAGTTCCCAATCTCCGATCAAGGCAGCGGCGCCGTCATGGGCTTACG CCTGATTCAACAAGTGCTGCTCGCACAAGATGGCATCCGTCCCCATACCCCGCTGTGTGATGTGGTGATGAACCACTTTA ACCATGATATTGATTCCATTGTTGCTTGGTCTAAAACCGCTCTACCTCGCGACTATGGGCAATTTTCACCTCAGATTTTC AGCCATGCCTATTGCGGCGATCCTCTCGCGATTGAATTACTCAAACAGACCGCCGCAGACATTGAAATGTTCCTGATCGC CTTACACCACAAAGGCGCAGAACGCATCTGTTTAATGGGCAGCATTGCTGAGCGTATCCAAGATTGGCTCTCCCCACCGG TACAGCAGTGGATTGTCAAACCGCAATCGGATGCTATCGAAGGTGCATTAATGTTTGCCGGTAAGCCTGAGCACAACCTG TATAAGGATGGTTTATGA
Upstream 100 bases:
>100_bases AAGGCGGTGTGTGTAACGGCATAACCGCGGGCTTTGATGACCCAAGAGATATCGCGTTTAACCCAGCAGGGCAAAAAGAT GACATGCTGCAAAACTGGCG
Downstream 100 bases:
>100_bases GTTATCGAATTGAATTTGCGGTGCTCTCGGAACAAAAACCGGATTGCCGTTTTGGTTTAACCCTGCACAATTTGAGCGAT CAAGATCTGCATGATTGGTC
Product: N-acetylglucosamine kinase
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; BadF/BadG/BcrA/BcrD Family ATPase; BadF/BadG/BcrA/BcrD Type ATPase; Glucosamine Kinase GpsK; ATPase Family Protein; N-Acetylglucosamine Kinase Protein; ATPase Badf/Badg/Bcra/Bcrd Type; BadF/BadG/BcrA/BcrD ATPase Family Superfamily; Oxidoreductase; BadF/BadG/BcrA/BcrD ATPase Family; Acyl-CoA Reductase/Dehydratase; Aryl-Alcohol Dehydrogenase; Glucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGRTMDPAWRLVSACHHQPICSLYRSRGGEPMNYYVGIDGGGTSCRARIRNQQGEWVGEAKSGSANIMLGVEVALRSVVD AITQAAEQGGLSPDDFPSMHVGLALAGAEQKEAWHAFMQQAHPFASITLNTDAYGACLGAHLGEEGAIMIAGTGSCGILL KGGKQYVVGGREFPISDQGSGAVMGLRLIQQVLLAQDGIRPHTPLCDVVMNHFNHDIDSIVAWSKTALPRDYGQFSPQIF SHAYCGDPLAIELLKQTAADIEMFLIALHHKGAERICLMGSIAERIQDWLSPPVQQWIVKPQSDAIEGALMFAGKPEHNL YKDGL
Sequences:
>Translated_325_residues MGRTMDPAWRLVSACHHQPICSLYRSRGGEPMNYYVGIDGGGTSCRARIRNQQGEWVGEAKSGSANIMLGVEVALRSVVD AITQAAEQGGLSPDDFPSMHVGLALAGAEQKEAWHAFMQQAHPFASITLNTDAYGACLGAHLGEEGAIMIAGTGSCGILL KGGKQYVVGGREFPISDQGSGAVMGLRLIQQVLLAQDGIRPHTPLCDVVMNHFNHDIDSIVAWSKTALPRDYGQFSPQIF SHAYCGDPLAIELLKQTAADIEMFLIALHHKGAERICLMGSIAERIQDWLSPPVQQWIVKPQSDAIEGALMFAGKPEHNL YKDGL >Mature_324_residues GRTMDPAWRLVSACHHQPICSLYRSRGGEPMNYYVGIDGGGTSCRARIRNQQGEWVGEAKSGSANIMLGVEVALRSVVDA ITQAAEQGGLSPDDFPSMHVGLALAGAEQKEAWHAFMQQAHPFASITLNTDAYGACLGAHLGEEGAIMIAGTGSCGILLK GGKQYVVGGREFPISDQGSGAVMGLRLIQQVLLAQDGIRPHTPLCDVVMNHFNHDIDSIVAWSKTALPRDYGQFSPQIFS HAYCGDPLAIELLKQTAADIEMFLIALHHKGAERICLMGSIAERIQDWLSPPVQQWIVKPQSDAIEGALMFAGKPEHNLY KDGL
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24647113, Length=255, Percent_Identity=24.3137254901961, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35060; Mature: 34929
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTMDPAWRLVSACHHQPICSLYRSRGGEPMNYYVGIDGGGTSCRARIRNQQGEWVGEA CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCC KSGSANIMLGVEVALRSVVDAITQAAEQGGLSPDDFPSMHVGLALAGAEQKEAWHAFMQQ CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCHHHHHHHHHHHH AHPFASITLNTDAYGACLGAHLGEEGAIMIAGTGSCGILLKGGKQYVVGGREFPISDQGS CCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEECCEECCCCCCCC GAVMGLRLIQQVLLAQDGIRPHTPLCDVVMNHFNHDIDSIVAWSKTALPRDYGQFSPQIF CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHH SHAYCGDPLAIELLKQTAADIEMFLIALHHKGAERICLMGSIAERIQDWLSPPVQQWIVK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC PQSDAIEGALMFAGKPEHNLYKDGL CCCHHHCEEEEECCCCCCCCCCCCC >Mature Secondary Structure GRTMDPAWRLVSACHHQPICSLYRSRGGEPMNYYVGIDGGGTSCRARIRNQQGEWVGEA CCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCC KSGSANIMLGVEVALRSVVDAITQAAEQGGLSPDDFPSMHVGLALAGAEQKEAWHAFMQQ CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCHHHHHHHHHHHH AHPFASITLNTDAYGACLGAHLGEEGAIMIAGTGSCGILLKGGKQYVVGGREFPISDQGS CCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEECCEECCCCCCCC GAVMGLRLIQQVLLAQDGIRPHTPLCDVVMNHFNHDIDSIVAWSKTALPRDYGQFSPQIF CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHH SHAYCGDPLAIELLKQTAADIEMFLIALHHKGAERICLMGSIAERIQDWLSPPVQQWIVK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC PQSDAIEGALMFAGKPEHNLYKDGL CCCHHHCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA