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The map label for this gene is 227080481

Identifier: 227080481

GI number: 227080481

Start: 256717

End: 257289

Strand: Reverse

Name: 227080481

Synonym: VCM66_0251

Alternate gene names: NA

Gene position: 257289-256717 (Counterclockwise)

Preceding gene: 227080482

Following gene: 227080480

Centisome position: 8.89

GC content: 54.28

Gene sequence:

>573_bases
ATGCTTGAGTCACTGCTGACGGAAATTCGCCAGTGCACAGTGTGTGAACCCCATTTACCCTTGGGCGCGAATCCGGTGAT
CCGCGCCCATCCGGCGGCGAAGATTTTAATTATTGGCCAAGCACCGGGCACTAAGGTGCACCAAACCTCCATTCCGTGGA
ATGATGCCAGCGGTGAGCGGCTGCGTCAGTGGTTGGGTTTAGATCGCGAAGCGTTTTACTGCGAAGAAAACATCGCCATC
ATGCCGATGGGGCTTTGCTATCCGGGCAAAGGGCGCAGCGGAGATTTACCGCCACGTAAAGAGTGTGCGCCACTGTGGCA
TGCCAAAGTGCTGGAACAACTGCCCAATCGGCAACTCACTCTCCTGATTGGACAATATGCACAGCATTATTATCTGTCGG
ACAAACCCAGCACCTTGACCGAAACGGTACAGCAGTGGCAACGCTGGGCGCCTTCGGTCTTACCGCTACCGCATCCCTCT
CCACGCAACACCTTATGGCTGAAAAATCACCCTTGGTTTGAGCAAGACATCGTGCCCTACCTACGCCAACGAGTGAAGCA
AGTACTTACATAG

Upstream 100 bases:

>100_bases
GCTTTCCAGAGCAAGTGGTCGATATCTTCGCCGATAACTACCAACGTTGGTGCGATAACTTGCCACTGCGTAATCAGATT
GATTTTGAAAAAGGCTACTG

Downstream 100 bases:

>100_bases
CAAGCCGTTAGGGTTTGAGGTAGTATGGCGCGCAGATTGATTAAGGAGTAAGCCATGCTTGAAACATTAACCTTGTGGTT
ACAGAAGTTTGATATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGERLRQWLGLDREAFYCEENIAI
MPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPSVLPLPHPS
PRNTLWLKNHPWFEQDIVPYLRQRVKQVLT

Sequences:

>Translated_190_residues
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGERLRQWLGLDREAFYCEENIAI
MPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPSVLPLPHPS
PRNTLWLKNHPWFEQDIVPYLRQRVKQVLT
>Mature_190_residues
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGERLRQWLGLDREAFYCEENIAI
MPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPSVLPLPHPS
PRNTLWLKNHPWFEQDIVPYLRQRVKQVLT

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 21764; Mature: 21764

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGER
CHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEECCCCCCCCCHHH
LRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLT
HHHHHCCCCHHEEECCCCEEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LLIGQYAQHYYLSDKPSTLTETVQQWQRWAPSVLPLPHPSPRNTLWLKNHPWFEQDIVPY
HHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
LRQRVKQVLT
HHHHHHHHCC
>Mature Secondary Structure
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGER
CHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEECCCCCCCCCHHH
LRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLT
HHHHHCCCCHHEEECCCCEEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LLIGQYAQHYYLSDKPSTLTETVQQWQRWAPSVLPLPHPSPRNTLWLKNHPWFEQDIVPY
HHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
LRQRVKQVLT
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]