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The map label for this gene is 227080455

Identifier: 227080455

GI number: 227080455

Start: 225344

End: 226393

Strand: Reverse

Name: 227080455

Synonym: VCM66_0223

Alternate gene names: NA

Gene position: 226393-225344 (Counterclockwise)

Preceding gene: 227080456

Following gene: 227080454

Centisome position: 7.83

GC content: 44.48

Gene sequence:

>1050_bases
ATGAAACACCTCTGGTTTGAAAAAGGTGCTTATGCTTCGAAAGCGGCACGCCAATACTTAAATGACCATTTTAACCCTCT
AGCAGTTAAGAAAACCGCTGTCATTCGTCATGCAGCGCTTGGCGACCAAGTCATTGTGCGCCCCTTTTTAGTTGAGGCTA
GAAAGTTCTTTCCTAATGCCGAAATCACCTTGGTCACCGTGTCAAACTACCTCTATGGAACCCCCTCAGACCTAGCGGAC
AAAACAGTAATAATGAAAAGCCGCGATGATTCAAAACAGCTGTCACTCAGGCAAAAATGGCAAGACTATAACCAACTGGA
AGCACAAGACATTATCTTTGATGTGGCAGGAACGAATCGCTCTTACTGGATGACATTACTGACTAAAGCGAAACTCAAAG
TGGGCTTTCCTTACAAACCCTTTTTATGTGGCACTTTGTATAACTTGGCAGTCTTTCGCTCTGATTTTCAACCGGAAGTG
GAATGCATGCTCGACATGCTGAAAATCCTTGGCCACAACCCGAGTTATCCGCTTGATTTTGCTTACCCTGACAATAGACA
AATCTGCGATCATGCCGCTCCGTATATCGTCTATTTCAGTGGTGCCTCCCAACTGCGCAAAATTTTAACTAAGCCTGAGA
TGCGGGCAGTGATTGAGCAAACCATTCAACAACAACCGAATGTGAAACATGTCTTTCTTGAAGGAAAGAATGAGTTTGAA
AAAGGTGAGTATTTACAAGACCTAGCCGACAATGGCTCGTTAACGATTCAACCATGTTTGCCTCTTGATGACTTAGTCAC
CTTCATTGCGAAAGCGACTCTGGTGATTGCCCCCGATACGGGCATCCGAAACGTGGCAATATCAACTCACACACCAACGG
TGGGAATTTTTTATGCTACGGTTCCCTTTCGTTACACCCCTCTCTATGAAGCGCATACTATCGTGATGAATGCGAATGGT
GAAAAGCCGTCTACTGAGCAAATTACCTCAGCGATTGATACAACATTAAAAATGCGCTTGGCTGCAGCCAAAAACACACA
GGAACAATGA

Upstream 100 bases:

>100_bases
GCTTTAAGCGAGTATGTCCGTTAGAACATTTAAATTGCTTAAATCAACTAAAACCTGCACAAGTCATTAAAGCTTTAGAT
AAATTTATTGGAAAAGATTC

Downstream 100 bases:

>100_bases
ATATGAGCAAAGTAACCGTATTGATCGCCAACCGACTGATTCGTCTGACTGGCAACCTATTTAAAATGCTCTCTTACCCA
TTTCATTGGGTGTTTCCAAA

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKHLWFEKGAYASKAARQYLNDHFNPLAVKKTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYLYGTPSDLAD
KTVIMKSRDDSKQLSLRQKWQDYNQLEAQDIIFDVAGTNRSYWMTLLTKAKLKVGFPYKPFLCGTLYNLAVFRSDFQPEV
ECMLDMLKILGHNPSYPLDFAYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFE
KGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVPFRYTPLYEAHTIVMNANG
EKPSTEQITSAIDTTLKMRLAAAKNTQEQ

Sequences:

>Translated_349_residues
MKHLWFEKGAYASKAARQYLNDHFNPLAVKKTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYLYGTPSDLAD
KTVIMKSRDDSKQLSLRQKWQDYNQLEAQDIIFDVAGTNRSYWMTLLTKAKLKVGFPYKPFLCGTLYNLAVFRSDFQPEV
ECMLDMLKILGHNPSYPLDFAYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFE
KGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVPFRYTPLYEAHTIVMNANG
EKPSTEQITSAIDTTLKMRLAAAKNTQEQ
>Mature_349_residues
MKHLWFEKGAYASKAARQYLNDHFNPLAVKKTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYLYGTPSDLAD
KTVIMKSRDDSKQLSLRQKWQDYNQLEAQDIIFDVAGTNRSYWMTLLTKAKLKVGFPYKPFLCGTLYNLAVFRSDFQPEV
ECMLDMLKILGHNPSYPLDFAYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFE
KGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVPFRYTPLYEAHTIVMNANG
EKPSTEQITSAIDTTLKMRLAAAKNTQEQ

Specific function: Unknown

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39495; Mature: 39495

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLWFEKGAYASKAARQYLNDHFNPLAVKKTAVIRHAALGDQVIVRPFLVEARKFFPNA
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
EITLVTVSNYLYGTPSDLADKTVIMKSRDDSKQLSLRQKWQDYNQLEAQDIIFDVAGTNR
CEEEEEECCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCC
SYWMTLLTKAKLKVGFPYKPFLCGTLYNLAVFRSDFQPEVECMLDMLKILGHNPSYPLDF
HHHHEEEEHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
AYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFE
CCCCCCCHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
KGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYAT
CHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCEEEEECCCCEEEEEEEE
VPFRYTPLYEAHTIVMNANGEKPSTEQITSAIDTTLKMRLAAAKNTQEQ
CCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKHLWFEKGAYASKAARQYLNDHFNPLAVKKTAVIRHAALGDQVIVRPFLVEARKFFPNA
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
EITLVTVSNYLYGTPSDLADKTVIMKSRDDSKQLSLRQKWQDYNQLEAQDIIFDVAGTNR
CEEEEEECCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCC
SYWMTLLTKAKLKVGFPYKPFLCGTLYNLAVFRSDFQPEVECMLDMLKILGHNPSYPLDF
HHHHEEEEHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
AYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFE
CCCCCCCHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
KGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYAT
CHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCEEEEECCCCEEEEEEEE
VPFRYTPLYEAHTIVMNANGEKPSTEQITSAIDTTLKMRLAAAKNTQEQ
CCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA