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The map label for this gene is 227080454

Identifier: 227080454

GI number: 227080454

Start: 224559

End: 225347

Strand: Reverse

Name: 227080454

Synonym: VCM66_0222

Alternate gene names: NA

Gene position: 225347-224559 (Counterclockwise)

Preceding gene: 227080455

Following gene: 227080453

Centisome position: 7.79

GC content: 44.23

Gene sequence:

>789_bases
ATGAATATGAGCAAAGTAACCGTATTGATCGCCAACCGACTGATTCGTCTGACTGGCAACCTATTTAAAATGCTCTCTTA
CCCATTTCATTGGGTGTTTCCAAAGCTGCGTTTTACGATTCCCGCTTACTCACCAGCTAAGCTAAAAATGCGCGCCAATG
CCACCATTCCACGCACTATTTGGCAAACCAACTTTACCGATCAAGCCTCACTACCGGTTTACCTTAACTATCTGTTTAAC
CGCCTCATGTCGCTCAACTGTGACTATCGCTATGTGAGTACCGAAGCACGTGGGGAATTCTTAAAAGAACATACATCACC
AGAAGTTTATGATGCTTACTCTCGCCTCACTAACGGTGCAGCCCAAGCTGACTTATGGCGTTTAGTGGTACTCAATACCT
ATGGTGGTGTGTATATGGATATTGATGCCACGCTAGTATGGCCGCTCGATAAGCTGCTCGGCGACTCACAAGAGCTGTAT
ATTCGCATTAAAAATAATACCGAGATCACTAACTACTTCATTGCAACTGCACCAAACAATCCAGATCTACAGGCCACCAT
TGAACAGGTGGTTTATAACGTGAATCACTACGAGCCTTCCATGGGGGTGTATCACTCCACAGGACCAACGGTACTCAATA
ACATCTTGTCAGCTAAAGCGGTGATTCACACTCAAGACCGTAAATACGTATGTATTCAGGGCACCTTTACCAATGAACAC
TTCCAGTACATTGATAAACCTCGTGGTAAATGGACACACATCAATCCCGAAGATCTCGTGAAAAAATAA

Upstream 100 bases:

>100_bases
TGAATGCGAATGGTGAAAAGCCGTCTACTGAGCAAATTACCTCAGCGATTGATACAACATTAAAAATGCGCTTGGCTGCA
GCCAAAAACACACAGGAACA

Downstream 100 bases:

>100_bases
TGCTGCTCCGTACGCTTTATACGCTTTTACTCACTTTAGCTGCACCGTTTTTACTGTATGGCCTCTATCGCCGTAGACAG
GGGAAACCCAGTGTCGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNMSKVTVLIANRLIRLTGNLFKMLSYPFHWVFPKLRFTIPAYSPAKLKMRANATIPRTIWQTNFTDQASLPVYLNYLFN
RLMSLNCDYRYVSTEARGEFLKEHTSPEVYDAYSRLTNGAAQADLWRLVVLNTYGGVYMDIDATLVWPLDKLLGDSQELY
IRIKNNTEITNYFIATAPNNPDLQATIEQVVYNVNHYEPSMGVYHSTGPTVLNNILSAKAVIHTQDRKYVCIQGTFTNEH
FQYIDKPRGKWTHINPEDLVKK

Sequences:

>Translated_262_residues
MNMSKVTVLIANRLIRLTGNLFKMLSYPFHWVFPKLRFTIPAYSPAKLKMRANATIPRTIWQTNFTDQASLPVYLNYLFN
RLMSLNCDYRYVSTEARGEFLKEHTSPEVYDAYSRLTNGAAQADLWRLVVLNTYGGVYMDIDATLVWPLDKLLGDSQELY
IRIKNNTEITNYFIATAPNNPDLQATIEQVVYNVNHYEPSMGVYHSTGPTVLNNILSAKAVIHTQDRKYVCIQGTFTNEH
FQYIDKPRGKWTHINPEDLVKK
>Mature_262_residues
MNMSKVTVLIANRLIRLTGNLFKMLSYPFHWVFPKLRFTIPAYSPAKLKMRANATIPRTIWQTNFTDQASLPVYLNYLFN
RLMSLNCDYRYVSTEARGEFLKEHTSPEVYDAYSRLTNGAAQADLWRLVVLNTYGGVYMDIDATLVWPLDKLLGDSQELY
IRIKNNTEITNYFIATAPNNPDLQATIEQVVYNVNHYEPSMGVYHSTGPTVLNNILSAKAVIHTQDRKYVCIQGTFTNEH
FQYIDKPRGKWTHINPEDLVKK

Specific function: Unknown

COG id: COG3774

COG function: function code M; Mannosyltransferase OCH1 and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007577 [H]

Pfam domain/function: PF04488 Gly_transf_sug [H]

EC number: NA

Molecular weight: Translated: 30271; Mature: 30271

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSKVTVLIANRLIRLTGNLFKMLSYPFHWVFPKLRFTIPAYSPAKLKMRANATIPRTI
CCCHHEEHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEECCCCCCEEEEEECCCCCHHH
WQTNFTDQASLPVYLNYLFNRLMSLNCDYRYVSTEARGEFLKEHTSPEVYDAYSRLTNGA
EECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCC
AQADLWRLVVLNTYGGVYMDIDATLVWPLDKLLGDSQELYIRIKNNTEITNYFIATAPNN
CHHHHEEEEEEECCCCEEEEECCEEEEEHHHHHCCCEEEEEEECCCCEEEEEEEEECCCC
PDLQATIEQVVYNVNHYEPSMGVYHSTGPTVLNNILSAKAVIHTQDRKYVCIQGTFTNEH
CCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHEEEEECCCEEEEEEECCCCHH
FQYIDKPRGKWTHINPEDLVKK
HHHHCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MNMSKVTVLIANRLIRLTGNLFKMLSYPFHWVFPKLRFTIPAYSPAKLKMRANATIPRTI
CCCHHEEHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEECCCCCCEEEEEECCCCCHHH
WQTNFTDQASLPVYLNYLFNRLMSLNCDYRYVSTEARGEFLKEHTSPEVYDAYSRLTNGA
EECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCC
AQADLWRLVVLNTYGGVYMDIDATLVWPLDKLLGDSQELYIRIKNNTEITNYFIATAPNN
CHHHHEEEEEEECCCCEEEEECCEEEEEHHHHHCCCEEEEEEECCCCEEEEEEEEECCCC
PDLQATIEQVVYNVNHYEPSMGVYHSTGPTVLNNILSAKAVIHTQDRKYVCIQGTFTNEH
CCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHEEEEECCCEEEEEEECCCCHH
FQYIDKPRGKWTHINPEDLVKK
HHHHCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8170389 [H]