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The map label for this gene is 226951013

Identifier: 226951013

GI number: 226951013

Start: 4070904

End: 4071800

Strand: Direct

Name: 226951013

Synonym: CLM_4050

Alternate gene names: NA

Gene position: 4070904-4071800 (Clockwise)

Preceding gene: 226951012

Following gene: 226951019

Centisome position: 97.97

GC content: 27.09

Gene sequence:

>897_bases
ATGAATACATTGAAAAATTGTACAGTATGCCCTAGAAATTGTGGTATAAATAGAATACAGGGAGCTTTAGGTTTTTGCAG
AGCCAATTCTAAGGTAAAAATCGCAAGAGCTTCTCTTCATCACTGGGAAGAGCCTTGTATATCAGGAGTTAATGGCTCAG
GGACCGTATTCTTTTCGAACTGCAATTTGAGATGTGTTTTTTGCCAAAATTATGAGATTAGCCATTTAGGTAAAGGGAAA
AAAATCTCCATAGAACACTTATCTAATATTTTTTTAGAACTGCAAAATAAAAAAGCTCATAATATAAATTTAGTTACTCC
TACCCACTATGTTCCTCAAATTATAGAAGCTATAAAAATTTCAAAATCTAATGGATTAACTATACCTATATTATATAATT
CTAATGGATATGAAAATATTGAAACTATAAAATCCCTAGAGGGCTATATTGATGTGTTTTTGCCAGATCTAAAATATTTT
GATGATAAGTATGCAAAGAAGTATTCCAATTGTAATAATTATTTTAATACTGCATGTAAAGCTATAAAAGAGATGTTTAA
TCAAGTTGGAGAGCCAATATTTAATAATGATGGAATTATTAAAAAAGGAATTATAATAAGGCATCTTATGTTACCTGGAC
TATTATTTGATACAAAAAAAATAATAGATTTTATATTTAAGGAATTTAATCATAAAGTATATATAAGTATAATGAATCAA
TACACCCCTATGAAGGATATCTGTAACTTTAATGAACTAAATAAAAATCTTAACCCTAAACATTATGATTCTATAATAGA
TTATTGTTTAGAACTAGGAGTAAAAAATGCATTTATACAGGAAACTTCATCTTCATCTAAAGAATTTATACCTAATTTCG
ATTTAACAGGAATATAA

Upstream 100 bases:

>100_bases
CTAGTTTTGCTGTTGTAAGCTTTATTTTTATGGTTCAATGTATTATATTTTATATTAAAGAAAAATAATATAATTCTAAA
GAAGAACAGGATGTGTAAAC

Downstream 100 bases:

>100_bases
AATATAAAAAATTATCTTAAAATAAATAATAACATAAATAAAAGCTATGAAATTTAGATATTATATTTATATTTCATAGC
TTTCTCAAAATAAAATTTAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNTLKNCTVCPRNCGINRIQGALGFCRANSKVKIARASLHHWEEPCISGVNGSGTVFFSNCNLRCVFCQNYEISHLGKGK
KISIEHLSNIFLELQNKKAHNINLVTPTHYVPQIIEAIKISKSNGLTIPILYNSNGYENIETIKSLEGYIDVFLPDLKYF
DDKYAKKYSNCNNYFNTACKAIKEMFNQVGEPIFNNDGIIKKGIIIRHLMLPGLLFDTKKIIDFIFKEFNHKVYISIMNQ
YTPMKDICNFNELNKNLNPKHYDSIIDYCLELGVKNAFIQETSSSSKEFIPNFDLTGI

Sequences:

>Translated_298_residues
MNTLKNCTVCPRNCGINRIQGALGFCRANSKVKIARASLHHWEEPCISGVNGSGTVFFSNCNLRCVFCQNYEISHLGKGK
KISIEHLSNIFLELQNKKAHNINLVTPTHYVPQIIEAIKISKSNGLTIPILYNSNGYENIETIKSLEGYIDVFLPDLKYF
DDKYAKKYSNCNNYFNTACKAIKEMFNQVGEPIFNNDGIIKKGIIIRHLMLPGLLFDTKKIIDFIFKEFNHKVYISIMNQ
YTPMKDICNFNELNKNLNPKHYDSIIDYCLELGVKNAFIQETSSSSKEFIPNFDLTGI
>Mature_298_residues
MNTLKNCTVCPRNCGINRIQGALGFCRANSKVKIARASLHHWEEPCISGVNGSGTVFFSNCNLRCVFCQNYEISHLGKGK
KISIEHLSNIFLELQNKKAHNINLVTPTHYVPQIIEAIKISKSNGLTIPILYNSNGYENIETIKSLEGYIDVFLPDLKYF
DDKYAKKYSNCNNYFNTACKAIKEMFNQVGEPIFNNDGIIKKGIIIRHLMLPGLLFDTKKIIDFIFKEFNHKVYISIMNQ
YTPMKDICNFNELNKNLNPKHYDSIIDYCLELGVKNAFIQETSSSSKEFIPNFDLTGI

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34007; Mature: 34007

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLKNCTVCPRNCGINRIQGALGFCRANSKVKIARASLHHWEEPCISGVNGSGTVFFSN
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEC
CNLRCVFCQNYEISHLGKGKKISIEHLSNIFLELQNKKAHNINLVTPTHYVPQIIEAIKI
CCEEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHC
SKSNGLTIPILYNSNGYENIETIKSLEGYIDVFLPDLKYFDDKYAKKYSNCNNYFNTACK
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKEMFNQVGEPIFNNDGIIKKGIIIRHLMLPGLLFDTKKIIDFIFKEFNHKVYISIMNQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECC
YTPMKDICNFNELNKNLNPKHYDSIIDYCLELGVKNAFIQETSSSSKEFIPNFDLTGI
CCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTLKNCTVCPRNCGINRIQGALGFCRANSKVKIARASLHHWEEPCISGVNGSGTVFFSN
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEC
CNLRCVFCQNYEISHLGKGKKISIEHLSNIFLELQNKKAHNINLVTPTHYVPQIIEAIKI
CCEEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHC
SKSNGLTIPILYNSNGYENIETIKSLEGYIDVFLPDLKYFDDKYAKKYSNCNNYFNTACK
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKEMFNQVGEPIFNNDGIIKKGIIIRHLMLPGLLFDTKKIIDFIFKEFNHKVYISIMNQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECC
YTPMKDICNFNELNKNLNPKHYDSIIDYCLELGVKNAFIQETSSSSKEFIPNFDLTGI
CCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]