| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is ykvI [H]
Identifier: 226951012
GI number: 226951012
Start: 4069825
End: 4070871
Strand: Direct
Name: ykvI [H]
Synonym: CLM_4049
Alternate gene names: 226951012
Gene position: 4069825-4070871 (Clockwise)
Preceding gene: 226951008
Following gene: 226951013
Centisome position: 97.94
GC content: 27.6
Gene sequence:
>1047_bases ATGGCTAAAAATAAATTTTCTTTAATTTTTCAAATGGGTGCAGTTTTCATTGGAACTATTGTTGGGGCTGGTCTTGCCTC TGGTCAAGAAATGACGCAATTTTTTACTACATACGGATACAAAAGTTTTATAGGCCTAACTATATGTTTTTTTATCTATG TTATTATGGGCTCTATAATTATTGACATTAGCATTAAGCATAATTTAACTTCCTATAATAGTTTAATTTCTTTAGTTAGT CCTGGATTTTTAGGCAAAGCTATTGATTTATTAACTGGATTGTTTCTTATAAGTAGCTCCGCAATAATTTTAGCTGGAAG TGGTTCTTTATTAAATCAATATTTTGGTATTTCTAAATGGGTTGGTATTTGTATAATGGTTATATCTTCTCTTGTTATAT TGCTAAGAGATACAAAGGGCCTTATTGAAATAAACTCTTTTATTGTTCCAGCTTTGATGATAGTAATCATAACTGTGTTT ATATTATATTTGGCTTTTTCAAGAAATGTTAGCATAGCCCAAATAAAATCAGTTCCACATTATAGAAAACATTGGTTAGT ATCTACACTTATATACAGTGGATTTAATATATTATGTTGCAGTGGTGTTTTGGTCCCTCTTAGCACTGAAATAAAGGATA AAACCATATTAAAATCCGGTTTAGTTGTGGGATCTTTAGGCCTTACAATTTTATCTTTTATAATAAATTTATTGCTTTTG CTTAATATTCCTTATATTTTTAAATATGAAATACCTCTTTTATATATAGCTAATAGATTTGGTACTATAATTCAGATAAT GCTTCTATGTATAATTTGGCTTGAGATGTTTTCCACTGAGGTTTCTAATATTTTTAGCGTAGGAAAAACCATGGAACAAT CCTTAGGAATATCTTATAATAAAGCAGTTTTCATAGTTATTCTTTTAGCTATACCTATATCTCAACTAGGATTTGTTAAT CTTATAAGTGTATTATATCCTAGTTTTGCTGTTGTAAGCTTTATTTTTATGGTTCAATGTATTATATTTTATATTAAAGA AAAATAA
Upstream 100 bases:
>100_bases TATTTTCTCCTTAAAAAGAAAATTTAATTAAAAATCATTATTTTTATTTTTATATATATATTTATATAAGGAGATTATAT TAATTAAAATAGGAGGATAT
Downstream 100 bases:
>100_bases TATAATTCTAAAGAAGAACAGGATGTGTAAACATGAATACATTGAAAAATTGTACAGTATGCCCTAGAAATTGTGGTATA AATAGAATACAGGGAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAKNKFSLIFQMGAVFIGTIVGAGLASGQEMTQFFTTYGYKSFIGLTICFFIYVIMGSIIIDISIKHNLTSYNSLISLVS PGFLGKAIDLLTGLFLISSSAIILAGSGSLLNQYFGISKWVGICIMVISSLVILLRDTKGLIEINSFIVPALMIVIITVF ILYLAFSRNVSIAQIKSVPHYRKHWLVSTLIYSGFNILCCSGVLVPLSTEIKDKTILKSGLVVGSLGLTILSFIINLLLL LNIPYIFKYEIPLLYIANRFGTIIQIMLLCIIWLEMFSTEVSNIFSVGKTMEQSLGISYNKAVFIVILLAIPISQLGFVN LISVLYPSFAVVSFIFMVQCIIFYIKEK
Sequences:
>Translated_348_residues MAKNKFSLIFQMGAVFIGTIVGAGLASGQEMTQFFTTYGYKSFIGLTICFFIYVIMGSIIIDISIKHNLTSYNSLISLVS PGFLGKAIDLLTGLFLISSSAIILAGSGSLLNQYFGISKWVGICIMVISSLVILLRDTKGLIEINSFIVPALMIVIITVF ILYLAFSRNVSIAQIKSVPHYRKHWLVSTLIYSGFNILCCSGVLVPLSTEIKDKTILKSGLVVGSLGLTILSFIINLLLL LNIPYIFKYEIPLLYIANRFGTIIQIMLLCIIWLEMFSTEVSNIFSVGKTMEQSLGISYNKAVFIVILLAIPISQLGFVN LISVLYPSFAVVSFIFMVQCIIFYIKEK >Mature_347_residues AKNKFSLIFQMGAVFIGTIVGAGLASGQEMTQFFTTYGYKSFIGLTICFFIYVIMGSIIIDISIKHNLTSYNSLISLVSP GFLGKAIDLLTGLFLISSSAIILAGSGSLLNQYFGISKWVGICIMVISSLVILLRDTKGLIEINSFIVPALMIVIITVFI LYLAFSRNVSIAQIKSVPHYRKHWLVSTLIYSGFNILCCSGVLVPLSTEIKDKTILKSGLVVGSLGLTILSFIINLLLLL NIPYIFKYEIPLLYIANRFGTIIQIMLLCIIWLEMFSTEVSNIFSVGKTMEQSLGISYNKAVFIVILLAIPISQLGFVNL ISVLYPSFAVVSFIFMVQCIIFYIKEK
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38461; Mature: 38330
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNKFSLIFQMGAVFIGTIVGAGLASGQEMTQFFTTYGYKSFIGLTICFFIYVIMGSII CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IDISIKHNLTSYNSLISLVSPGFLGKAIDLLTGLFLISSSAIILAGSGSLLNQYFGISKW EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH VGICIMVISSLVILLRDTKGLIEINSFIVPALMIVIITVFILYLAFSRNVSIAQIKSVPH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH YRKHWLVSTLIYSGFNILCCSGVLVPLSTEIKDKTILKSGLVVGSLGLTILSFIINLLLL HHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNIPYIFKYEIPLLYIANRFGTIIQIMLLCIIWLEMFSTEVSNIFSVGKTMEQSLGISYN HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KAVFIVILLAIPISQLGFVNLISVLYPSFAVVSFIFMVQCIIFYIKEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKNKFSLIFQMGAVFIGTIVGAGLASGQEMTQFFTTYGYKSFIGLTICFFIYVIMGSII CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IDISIKHNLTSYNSLISLVSPGFLGKAIDLLTGLFLISSSAIILAGSGSLLNQYFGISKW EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH VGICIMVISSLVILLRDTKGLIEINSFIVPALMIVIITVFILYLAFSRNVSIAQIKSVPH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH YRKHWLVSTLIYSGFNILCCSGVLVPLSTEIKDKTILKSGLVVGSLGLTILSFIINLLLL HHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNIPYIFKYEIPLLYIANRFGTIIQIMLLCIIWLEMFSTEVSNIFSVGKTMEQSLGISYN HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KAVFIVILLAIPISQLGFVNLISVLYPSFAVVSFIFMVQCIIFYIKEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]