Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is 226950622
Identifier: 226950622
GI number: 226950622
Start: 3643547
End: 3644644
Strand: Direct
Name: 226950622
Synonym: CLM_3606
Alternate gene names: NA
Gene position: 3643547-3644644 (Clockwise)
Preceding gene: 226950621
Following gene: 226950623
Centisome position: 87.68
GC content: 28.78
Gene sequence:
>1098_bases TTGAAAGTTACGTTTCCACACCTAGGTAATAGCTGCTACGCAGCTAAAGCAATTTTTGATACTTTAGGAATTGAATATAT AATTCCCAAAGCTAGTAATAAAAAAGCTTTGGAAATAGGTTCTCTTTATTCTCCAGATGAAATATGTCTTCCCTTTAAAA TAATGATTGGAAACTATGTTCAAAGTATAGAAGCAGGTGCTGATACTATTGTAATAGCAGGTAGTTGTGGCCCTTGTAGG TTCGGAGAATATTGTGAGCTTCAAATGAACACATTAAAAAAATTAGGTTATGATTTGGATTTTATAGTAATAGATTCTCC TAAAGATATAGGTAAAGATGAATTTTTAACAAGAATAAACAAAATAGCAATTCACAGTAACGTAAGTTCTACGAAAAAAT TTTCTTCATTAATATATGGTTTAAAAATAATAAACTTAATGGATTCTTTAGATAAAAAGGCAAAAATAAAAGCTGGCTAT GAAATAAATAATGGAGACTCAAAAAAAATTCTTTGGGATTGTAAAAATCAGATTTTAAATTGTAAAACTGCCAGAGAAAT GATTAGCTTAGTAAAACATTATCATAAAAAATTAAAAGAAGTACCCATTGATAAATCAAAAAATCCATTAAAAATAGCTA TAATAGGAGAAATTTATACTATAATTGAACCTTTTTCAAATCTTTATATTGAAGATAAATTAATGGATTATGGTGTTTGT ACTTCTAAAGTTTTATATCCTAGTTGGTGGGTGAAAAATACCGCTTTATCCCCTCTTAAATTAGATTGTCTTTCATTAAA AAAAGCTTCTAAAAAATATTTATCATTAGGTATAGGTGGTTATGGAAGAGAATGTATTGGTGAAGCTGTTCTTGCTAAAA AAAATGGATTTCATGGAGCTATTCAAATTTTTCCTTTAGGATGTATGCCAGAAATTGTTTCTAAATCCATACTCCCTACT ATATCCAAAAATGAAAACTTCCCTATTATGTCCCTTGTGGTAGATGAAATGACAGGAGAAGCAGGATATTCAACTCGCAT AGAAGCTTTTATAGATTTATTAGAAAGGAGAGAAGACAATGTATTATATGGGAGTTGA
Upstream 100 bases:
>100_bases CTATATTAATTCTAAAGATAGATGAACAAACAGGCGAAGCAGGATTTCACACTAGAATTGAGGCCTTTACAGATATGTTA GAAAGGAAGTGTATTTAATT
Downstream 100 bases:
>100_bases TATAGGTTCTGTAAGTACAGATATTGTAATTATTGATGAAAATTCAAATGTTATTGATTCTTTGTATTTAAGAACCAAAG GAAATCCTATAAAAACTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKIMIGNYVQSIEAGADTIVIAGSCGPCR FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS
Sequences:
>Translated_365_residues MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKIMIGNYVQSIEAGADTIVIAGSCGPCR FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS >Mature_365_residues MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKIMIGNYVQSIEAGADTIVIAGSCGPCR FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS
Specific function: Unknown
COG id: COG3581
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40688; Mature: 40688
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKIMIGNYV CEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHH QSIEAGADTIVIAGSCGPCRFGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRIN HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH KIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGYEINNGDSKKILWDCKNQILN HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEECCCCCCEEEHHHHHHHHC CKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEHHHHHHCCCC TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGA CCCEECCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCE IQIFPLGCMPEIVSKSILPTISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDN EEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VLYGS CCCCC >Mature Secondary Structure MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKIMIGNYV CEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHH QSIEAGADTIVIAGSCGPCRFGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRIN HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH KIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGYEINNGDSKKILWDCKNQILN HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEECCCCCCEEEHHHHHHHHC CKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEHHHHHHCCCC TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGA CCCEECCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCE IQIFPLGCMPEIVSKSILPTISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDN EEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VLYGS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA