Click here to switch to the map view.

The map label for this gene is 226950621

Identifier: 226950621

GI number: 226950621

Start: 3642651

End: 3643544

Strand: Direct

Name: 226950621

Synonym: CLM_3605

Alternate gene names: NA

Gene position: 3642651-3643544 (Clockwise)

Preceding gene: 226950619

Following gene: 226950622

Centisome position: 87.66

GC content: 25.5

Gene sequence:

>894_bases
ATGAAAGTAGGAATACCAAGAGGATTACTTTATTGTAAATATAATATATTTTTTCATAGTTTTTTTGAAGAATTGGGTGC
TGAAATTATAACTTCTCCAAAGACTAATAAAAATATATTAAATAGTGGAGTAAAACTTTCTGTAGATGAAGCTTGTCTTC
CTATAAAAATTTTTCATGGACATGTATCCTCTATCAAAGATGAATGCGATATTATACTACTTCCTAGAATAATGCAAATA
GAAAAAAATAAATTTATATGTCCCAAGTTTTGTGGTTTACCAGAAATGGTTATAAATAATATACCTAATATGCCTAAAAC
CATTACTTATCCTATTTATTATCATTCAAAACATAGCCTTAAAAATTGGGCTTTAAAAGCTGGTCTAAATATAACTAAAA
ATATTCCTAAAATATTTAAAGCCTATAATATAGCTATAAAAAATCAAGAAAACTATGATACAGGTATAAACATAATATCA
TCTAATTTAAATATAGCACTATTAGGTCATCCTTATAATGTTTATGATAATTACGTAAATATGAATATAGTAAATATTCT
TAAAAATTTAAATATAGGTATAATAACTGAAGAGTTTGTAAGTGAAGATGATAAAAACAAATACGTAAAGGAATTATTTA
AAAATCCTTTTTGGAGTTTTGCTAAAAATTCTTATGGAGCTGCAGCTTATTTGGGTAGTGAACATAAGGTAGATGGCATA
ATATATATATCCTCTTTCGGTTGTGGAATAGATTCTATAATAATAGATCTTATAAAAAATAAATTAAGGGATTTTCCTAT
ATTAATTCTAAAGATAGATGAACAAACAGGCGAAGCAGGATTTCACACTAGAATTGAGGCCTTTACAGATATGTTAGAAA
GGAAGTGTATTTAA

Upstream 100 bases:

>100_bases
ATTCTCTGCAAATGAAAAAATATTATTACTATATATATGAATAGTTAATATATATTTGTCAATAATTTAAAAAGAATTAT
GAATTAAAGGAGTACGATTT

Downstream 100 bases:

>100_bases
TTTTGAAAGTTACGTTTCCACACCTAGGTAATAGCTGCTACGCAGCTAAAGCAATTTTTGATACTTTAGGAATTGAATAT
ATAATTCCCAAAGCTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: CoA-Substrate-Specific Activase Domain Protein; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; CoA Activase; BadF/BadG/BcrA/BcrD ATPase Family Protein; CoA-Substrate-Specific Activase Domain-Containing Protein; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-CoA Dehydratase Activator

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKVGIPRGLLYCKYNIFFHSFFEELGAEIITSPKTNKNILNSGVKLSVDEACLPIKIFHGHVSSIKDECDIILLPRIMQI
EKNKFICPKFCGLPEMVINNIPNMPKTITYPIYYHSKHSLKNWALKAGLNITKNIPKIFKAYNIAIKNQENYDTGINIIS
SNLNIALLGHPYNVYDNYVNMNIVNILKNLNIGIITEEFVSEDDKNKYVKELFKNPFWSFAKNSYGAAAYLGSEHKVDGI
IYISSFGCGIDSIIIDLIKNKLRDFPILILKIDEQTGEAGFHTRIEAFTDMLERKCI

Sequences:

>Translated_297_residues
MKVGIPRGLLYCKYNIFFHSFFEELGAEIITSPKTNKNILNSGVKLSVDEACLPIKIFHGHVSSIKDECDIILLPRIMQI
EKNKFICPKFCGLPEMVINNIPNMPKTITYPIYYHSKHSLKNWALKAGLNITKNIPKIFKAYNIAIKNQENYDTGINIIS
SNLNIALLGHPYNVYDNYVNMNIVNILKNLNIGIITEEFVSEDDKNKYVKELFKNPFWSFAKNSYGAAAYLGSEHKVDGI
IYISSFGCGIDSIIIDLIKNKLRDFPILILKIDEQTGEAGFHTRIEAFTDMLERKCI
>Mature_297_residues
MKVGIPRGLLYCKYNIFFHSFFEELGAEIITSPKTNKNILNSGVKLSVDEACLPIKIFHGHVSSIKDECDIILLPRIMQI
EKNKFICPKFCGLPEMVINNIPNMPKTITYPIYYHSKHSLKNWALKAGLNITKNIPKIFKAYNIAIKNQENYDTGINIIS
SNLNIALLGHPYNVYDNYVNMNIVNILKNLNIGIITEEFVSEDDKNKYVKELFKNPFWSFAKNSYGAAAYLGSEHKVDGI
IYISSFGCGIDSIIIDLIKNKLRDFPILILKIDEQTGEAGFHTRIEAFTDMLERKCI

Specific function: Unknown

COG id: COG3580

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33838; Mature: 33838

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGIPRGLLYCKYNIFFHSFFEELGAEIITSPKTNKNILNSGVKLSVDEACLPIKIFHG
CCCCCCCCEEEEEHHHHHHHHHHHHCHHHCCCCCCCHHHHCCCCEEEECCCCEEEEEECC
HVSSIKDECDIILLPRIMQIEKNKFICPKFCGLPEMVINNIPNMPKTITYPIYYHSKHSL
CHHHHCCCCCEEEECHHHHHCCCCCCCHHHCCCHHHHHHCCCCCCCEEEEEEEECCCCCH
KNWALKAGLNITKNIPKIFKAYNIAIKNQENYDTGINIISSNLNIALLGHPYNVYDNYVN
HHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEECCCEEEEEECCHHHHHCCCC
MNIVNILKNLNIGIITEEFVSEDDKNKYVKELFKNPFWSFAKNSYGAAAYLGSEHKVDGI
HHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCCEE
IYISSFGCGIDSIIIDLIKNKLRDFPILILKIDEQTGEAGFHTRIEAFTDMLERKCI
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVGIPRGLLYCKYNIFFHSFFEELGAEIITSPKTNKNILNSGVKLSVDEACLPIKIFHG
CCCCCCCCEEEEEHHHHHHHHHHHHCHHHCCCCCCCHHHHCCCCEEEECCCCEEEEEECC
HVSSIKDECDIILLPRIMQIEKNKFICPKFCGLPEMVINNIPNMPKTITYPIYYHSKHSL
CHHHHCCCCCEEEECHHHHHCCCCCCCHHHCCCHHHHHHCCCCCCCEEEEEEEECCCCCH
KNWALKAGLNITKNIPKIFKAYNIAIKNQENYDTGINIISSNLNIALLGHPYNVYDNYVN
HHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEECCCEEEEEECCHHHHHCCCC
MNIVNILKNLNIGIITEEFVSEDDKNKYVKELFKNPFWSFAKNSYGAAAYLGSEHKVDGI
HHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCCEE
IYISSFGCGIDSIIIDLIKNKLRDFPILILKIDEQTGEAGFHTRIEAFTDMLERKCI
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA