Click here to switch to the map view.

The map label for this gene is 226950555

Identifier: 226950555

GI number: 226950555

Start: 3567585

End: 3569360

Strand: Direct

Name: 226950555

Synonym: CLM_3531

Alternate gene names: NA

Gene position: 3567585-3569360 (Clockwise)

Preceding gene: 226950547

Following gene: 226950558

Centisome position: 85.86

GC content: 21.96

Gene sequence:

>1776_bases
ATGGACTCTAATAAATCATATATTTTTAAAAATATATATGGTAATATGTCTCAATTTTATATTAACAAAGATAATACCTT
AATGTGTAATGAGATTTCTAAAGAAACAAAAATACTGGAAAATGTTTCAAAATTCAATATAAATATAACCTATTTAGGAA
TAATAGAAGTAGTTTGTATAACTTTTGATGGATTTATAAAATACTGTAAATTTAATAAAAAGTGGTCCACTCAAACTCTT
TATAAATTAAAATCTCATAACAATAGTGTAGATGAAGTAAACCTATTTTCTAAAGGAAATAAACTTCATATATTTTTTAT
GTTCTATGAAAATAGATATGATTCTAGTGGAAATATTCTACACTACGTATGGGATGGAAGCAAATTTAAAACTAATATAA
TAGCACCTATAAATACTATCGATGGTGTAGAAAGGCATTATTATTTAGAAACATTAGATAACACTATTAATATGTTCTAC
ATAACTAAAGAAAAAAACTCTAACGTTATTAGTTTATGTAAGTATTTAAATGATGATGATTGGAGCAGTCCTAAAAAGTT
ATATAGGCTAGATGGTAATAATATCAATTTTTCTACTTTGAAGAGAAATAAAGAATTTAATATTTTAAATTTATCCGAAG
AAAATGGGATATACACACTAGAACATGTGACAATAGATACTAAAGATAGCATTAATAATTTTCCTATTTATAAAACAAAT
AATCCTATATATGAATCTACATTTATTATATTCAATAATATATTATACTGTGTATTGTCAGAACATAATAAATTAATGTA
CTCTTCTTTTAATGGTATGAAATGGTCTAATTCTTCTGAAATTGATACTGAATCCTTTGATAATATAGGTATGTATAAAT
ATATATATGAGGAAAGCCCTTTAGATAAATCTATAGAAAGTAAAAACATATTTGCTTCTATATCCGATGATATTAATATA
TTTTTACCTAAAGTCACTAAAACATATAATAATAAAAACAATGATAAATATGATGCGGAAAGTACTATAAGAAAATTACT
TCAAGAAGTATCTAAAAAAAATACCGTAAATTATGATTTAATGAACAAAACAATATTACTAGCAGAAAAATTAAAGGAAA
AGAATATCCATGTTAATAATCTTATTGAAAACTTAAATAAAGTTTCTATACAAAAGTCTAATATTGAAAGCAAGTATAAA
TCTATATTGGAAGCTAATAATCAATTAAAGATTCAAACAGAAGACTTTAAAGGAAAGCTAAATAAAGAAAGTGAAAAAAA
TGAACTTCTAAAAATAAGACTTAAAGAGAAAATAGATGAAAATGAAAACTTAAATAATATAATTGAAAGATCAAAAAATC
AAAATATTACAGTAATAAAGAATCTTGAGAATAAATATCTTATTGAAATTAAAAATATAAAAAAACAACTTGAAGATAAG
CAAAATGAACTTAAAGTTTTACTTGATAAGAATAAAAACTTAGAAGAAAATATTAAAGAATTAAAATTAGAAAATGATAA
TACAAAAGAGGAATTGGAAAAATCTGAAAGCCATACCCTTTCGAATTTAAGAAATAAATATGATATGGAAGTTTCAACTA
TAAAACAACAACTTGAAGAAAAAGAAAAAAGCTTTAAATATATAACAGATTATTCACAAAAATTAGAAGCAACTTTAGAC
GAATTAAAATCTGAAAACTCAATTATAAAACAGCAGCTTGAAAATTCTAAAAACAAAAACTTTATAGAAAAAATTTTTGG
CAAATCATACAAATAA

Upstream 100 bases:

>100_bases
AATTTTTGTGTAAATTGAATAAATTTTTAGTAATATTTTTCATTAGAAAGAATATAAAAAACTTATTATTAATATAATTT
TATAAAGGTAGGTGAATATT

Downstream 100 bases:

>100_bases
CTATTAACTTGTAGTTCCAATATAAAAATAAGCTATAACAAATAATTAATTTTGAATATTTGGATTTCTAAAAACTCCTT
GCATTTTATTAAATACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MDSNKSYIFKNIYGNMSQFYINKDNTLMCNEISKETKILENVSKFNINITYLGIIEVVCITFDGFIKYCKFNKKWSTQTL
YKLKSHNNSVDEVNLFSKGNKLHIFFMFYENRYDSSGNILHYVWDGSKFKTNIIAPINTIDGVERHYYLETLDNTINMFY
ITKEKNSNVISLCKYLNDDDWSSPKKLYRLDGNNINFSTLKRNKEFNILNLSEENGIYTLEHVTIDTKDSINNFPIYKTN
NPIYESTFIIFNNILYCVLSEHNKLMYSSFNGMKWSNSSEIDTESFDNIGMYKYIYEESPLDKSIESKNIFASISDDINI
FLPKVTKTYNNKNNDKYDAESTIRKLLQEVSKKNTVNYDLMNKTILLAEKLKEKNIHVNNLIENLNKVSIQKSNIESKYK
SILEANNQLKIQTEDFKGKLNKESEKNELLKIRLKEKIDENENLNNIIERSKNQNITVIKNLENKYLIEIKNIKKQLEDK
QNELKVLLDKNKNLEENIKELKLENDNTKEELEKSESHTLSNLRNKYDMEVSTIKQQLEEKEKSFKYITDYSQKLEATLD
ELKSENSIIKQQLENSKNKNFIEKIFGKSYK

Sequences:

>Translated_591_residues
MDSNKSYIFKNIYGNMSQFYINKDNTLMCNEISKETKILENVSKFNINITYLGIIEVVCITFDGFIKYCKFNKKWSTQTL
YKLKSHNNSVDEVNLFSKGNKLHIFFMFYENRYDSSGNILHYVWDGSKFKTNIIAPINTIDGVERHYYLETLDNTINMFY
ITKEKNSNVISLCKYLNDDDWSSPKKLYRLDGNNINFSTLKRNKEFNILNLSEENGIYTLEHVTIDTKDSINNFPIYKTN
NPIYESTFIIFNNILYCVLSEHNKLMYSSFNGMKWSNSSEIDTESFDNIGMYKYIYEESPLDKSIESKNIFASISDDINI
FLPKVTKTYNNKNNDKYDAESTIRKLLQEVSKKNTVNYDLMNKTILLAEKLKEKNIHVNNLIENLNKVSIQKSNIESKYK
SILEANNQLKIQTEDFKGKLNKESEKNELLKIRLKEKIDENENLNNIIERSKNQNITVIKNLENKYLIEIKNIKKQLEDK
QNELKVLLDKNKNLEENIKELKLENDNTKEELEKSESHTLSNLRNKYDMEVSTIKQQLEEKEKSFKYITDYSQKLEATLD
ELKSENSIIKQQLENSKNKNFIEKIFGKSYK
>Mature_591_residues
MDSNKSYIFKNIYGNMSQFYINKDNTLMCNEISKETKILENVSKFNINITYLGIIEVVCITFDGFIKYCKFNKKWSTQTL
YKLKSHNNSVDEVNLFSKGNKLHIFFMFYENRYDSSGNILHYVWDGSKFKTNIIAPINTIDGVERHYYLETLDNTINMFY
ITKEKNSNVISLCKYLNDDDWSSPKKLYRLDGNNINFSTLKRNKEFNILNLSEENGIYTLEHVTIDTKDSINNFPIYKTN
NPIYESTFIIFNNILYCVLSEHNKLMYSSFNGMKWSNSSEIDTESFDNIGMYKYIYEESPLDKSIESKNIFASISDDINI
FLPKVTKTYNNKNNDKYDAESTIRKLLQEVSKKNTVNYDLMNKTILLAEKLKEKNIHVNNLIENLNKVSIQKSNIESKYK
SILEANNQLKIQTEDFKGKLNKESEKNELLKIRLKEKIDENENLNNIIERSKNQNITVIKNLENKYLIEIKNIKKQLEDK
QNELKVLLDKNKNLEENIKELKLENDNTKEELEKSESHTLSNLRNKYDMEVSTIKQQLEEKEKSFKYITDYSQKLEATLD
ELKSENSIIKQQLENSKNKNFIEKIFGKSYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69697; Mature: 69697

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNKSYIFKNIYGNMSQFYINKDNTLMCNEISKETKILENVSKFNINITYLGIIEVVCI
CCCCCCEEEHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHH
TFDGFIKYCKFNKKWSTQTLYKLKSHNNSVDEVNLFSKGNKLHIFFMFYENRYDSSGNIL
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECEECCCCCEE
HYVWDGSKFKTNIIAPINTIDGVERHYYLETLDNTINMFYITKEKNSNVISLCKYLNDDD
EEEECCCEEEEEEEECCCHHCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCC
WSSPKKLYRLDGNNINFSTLKRNKEFNILNLSEENGIYTLEHVTIDTKDSINNFPIYKTN
CCCCCCEEEECCCCCCHHEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEECC
NPIYESTFIIFNNILYCVLSEHNKLMYSSFNGMKWSNSSEIDTESFDNIGMYKYIYEESP
CCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
LDKSIESKNIFASISDDINIFLPKVTKTYNNKNNDKYDAESTIRKLLQEVSKKNTVNYDL
CCCCCCCCCEEEEECCCCEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEH
MNKTILLAEKLKEKNIHVNNLIENLNKVSIQKSNIESKYKSILEANNQLKIQTEDFKGKL
HCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCC
NKESEKNELLKIRLKEKIDENENLNNIIERSKNQNITVIKNLENKYLIEIKNIKKQLEDK
CCCCCCCHHEEEEEHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHCC
QNELKVLLDKNKNLEENIKELKLENDNTKEELEKSESHTLSNLRNKYDMEVSTIKQQLEE
HHHEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KEKSFKYITDYSQKLEATLDELKSENSIIKQQLENSKNKNFIEKIFGKSYK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MDSNKSYIFKNIYGNMSQFYINKDNTLMCNEISKETKILENVSKFNINITYLGIIEVVCI
CCCCCCEEEHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHH
TFDGFIKYCKFNKKWSTQTLYKLKSHNNSVDEVNLFSKGNKLHIFFMFYENRYDSSGNIL
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECEECCCCCEE
HYVWDGSKFKTNIIAPINTIDGVERHYYLETLDNTINMFYITKEKNSNVISLCKYLNDDD
EEEECCCEEEEEEEECCCHHCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCC
WSSPKKLYRLDGNNINFSTLKRNKEFNILNLSEENGIYTLEHVTIDTKDSINNFPIYKTN
CCCCCCEEEECCCCCCHHEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEECC
NPIYESTFIIFNNILYCVLSEHNKLMYSSFNGMKWSNSSEIDTESFDNIGMYKYIYEESP
CCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
LDKSIESKNIFASISDDINIFLPKVTKTYNNKNNDKYDAESTIRKLLQEVSKKNTVNYDL
CCCCCCCCCEEEEECCCCEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEH
MNKTILLAEKLKEKNIHVNNLIENLNKVSIQKSNIESKYKSILEANNQLKIQTEDFKGKL
HCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCC
NKESEKNELLKIRLKEKIDENENLNNIIERSKNQNITVIKNLENKYLIEIKNIKKQLEDK
CCCCCCCHHEEEEEHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHCC
QNELKVLLDKNKNLEENIKELKLENDNTKEELEKSESHTLSNLRNKYDMEVSTIKQQLEE
HHHEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KEKSFKYITDYSQKLEATLDELKSENSIIKQQLENSKNKNFIEKIFGKSYK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA