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The map label for this gene is 226950558

Identifier: 226950558

GI number: 226950558

Start: 3570503

End: 3570961

Strand: Direct

Name: 226950558

Synonym: CLM_3535

Alternate gene names: NA

Gene position: 3570503-3570961 (Clockwise)

Preceding gene: 226950555

Following gene: 226950570

Centisome position: 85.93

GC content: 25.71

Gene sequence:

>459_bases
ATGATTGTAAAGAATGAAGAAATTACATTGGAAAGGTGTTTAAACTGTGGCGAAGATTTCGTTGATGAAATTATAATAGT
TGACACAGGTTCTACTGATAAAACTAAAGAAATTGCTAAAAAATTTACAGATAAAATTTATGATTTTGAATGGTTACAAG
ATTTTGCAGCAGCAAGAAATTTTTCATTTAGCAAAGCTACCAAAGAATATATATTTTACTTAGATGCTGACGACATAATT
TTGGAAGAAGACCAGAAAAAATTAAAAAAATTAAAATCTAGTTTAGATAAATCTATTGATTCTGTTACTATGTTTTACAA
TATGAATCTTGATAAAGACGGTATACCTGCTTTAAGTTATAGAAAAAATAGACTTGTTAGACGTGCAAATAATTTTAAAT
GGTACGTTTATTTTAGTAACACTTATTATAAAAAAATAACCGTACACACATTAACATAA

Upstream 100 bases:

>100_bases
ATCTAGCTCTACTTATATACTAGGAGATGATAATTAAATAGTATATAAAATAAATAGTAAATTTACATGAGGTGATTTAA
TTATAACTATAAGTTTATGT

Downstream 100 bases:

>100_bases
GTGTGTACGGCTATTTTTTATTTACTTTTTCATATCTTTTACCTGTAGTGGATTTAATTTTTTCTTTTCTTTAGCCAAAG
TTAATTGACTGTCCATTAAT

Product: group 2 family glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIVKNEEITLERCLNCGEDFVDEIIIVDTGSTDKTKEIAKKFTDKIYDFEWLQDFAAARNFSFSKATKEYIFYLDADDII
LEEDQKKLKKLKSSLDKSIDSVTMFYNMNLDKDGIPALSYRKNRLVRRANNFKWYVYFSNTYYKKITVHTLT

Sequences:

>Translated_152_residues
MIVKNEEITLERCLNCGEDFVDEIIIVDTGSTDKTKEIAKKFTDKIYDFEWLQDFAAARNFSFSKATKEYIFYLDADDII
LEEDQKKLKKLKSSLDKSIDSVTMFYNMNLDKDGIPALSYRKNRLVRRANNFKWYVYFSNTYYKKITVHTLT
>Mature_152_residues
MIVKNEEITLERCLNCGEDFVDEIIIVDTGSTDKTKEIAKKFTDKIYDFEWLQDFAAARNFSFSKATKEYIFYLDADDII
LEEDQKKLKKLKSSLDKSIDSVTMFYNMNLDKDGIPALSYRKNRLVRRANNFKWYVYFSNTYYKKITVHTLT

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 17997; Mature: 17997

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKNEEITLERCLNCGEDFVDEIIIVDTGSTDKTKEIAKKFTDKIYDFEWLQDFAAARN
CCCCCCCCHHHHHHCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
FSFSKATKEYIFYLDADDIILEEDQKKLKKLKSSLDKSIDSVTMFYNMNLDKDGIPALSY
CCCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHH
RKNRLVRRANNFKWYVYFSNTYYKKITVHTLT
HHHHHHHHCCCEEEEEEECCCEEEEEEEEEEC
>Mature Secondary Structure
MIVKNEEITLERCLNCGEDFVDEIIIVDTGSTDKTKEIAKKFTDKIYDFEWLQDFAAARN
CCCCCCCCHHHHHHCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
FSFSKATKEYIFYLDADDIILEEDQKKLKKLKSSLDKSIDSVTMFYNMNLDKDGIPALSY
CCCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHH
RKNRLVRRANNFKWYVYFSNTYYKKITVHTLT
HHHHHHHHCCCEEEEEEECCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]