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The map label for this gene is 226950524

Identifier: 226950524

GI number: 226950524

Start: 3519332

End: 3520756

Strand: Reverse

Name: 226950524

Synonym: CLM_3500

Alternate gene names: NA

Gene position: 3520756-3519332 (Counterclockwise)

Preceding gene: 226950525

Following gene: 226950523

Centisome position: 84.73

GC content: 25.89

Gene sequence:

>1425_bases
ATGAGTGATAGTCCCAAACAGTTTATAAAAAGATTTATTGGTTTTTCTATGGGACCAATATTATCAGCTATTATTAGCTT
TTTTACTGTTCCTATAACTACATATTTTGTAGTTCCAACAGAATTTGGAAAAGCTTCTATGTATACAATGGCTTTAAGCA
TTAGTTCAATGTTTATATTTTTAGGTATGGATCAATCTTTCACTAGGGAATTTAATTCAGAAGAAGATAAAAAATCTTTA
TTTTGGAATTCTTTAATTGTACCTTTAATATTTTCGTTAATACTAGGATTTTTTTACATAATTTGCTATCAACCATTATC
TGTGTTAATGATTGATACTGTTGATAGGTATATAGTAGTTATTTTGGCGATATCATTACCTTTTGCAGTTATAGATAGAT
TTAATTTATTATTAATAAGAATGGAAGAGAAAGCTAGATTATATTCTGTCTTAAATGTAATAAGTAAAATTATAAATGTT
GCGGTTTTAATACCATATCTTTTATACATAGATAAAAGTTTTAAAGGAATAATAAATGCAGGTTTTGTGTCATTAGTTTT
TATGTGTATAGTAGAATGTCTTTTTATAGGAGATTACTGGATTGCAAAATTTAAAATAAATAAAACTTTAATAAATAAAA
TGTTTAGATATGGGATACCTTTAATACCAGCATCTGTAATTGTTTGGTTTTTGAATTCTATGGATAAAATAGCAATGAGA
CAATGGTCCTCTTTTGAAGAAATAGGATTGTATTCTGCAGCATTTAAAATTGTTACTGTAGTAAGTATAGTTCAAAGTGC
ATTTTGTACTTTTTGGACACCAACTGCATTTAGATGGTATGAAGAAAAGGTAGAAGGCGAAAAATTTATGAAGGTAAGCA
ATATGTTAATGTGTTTCATGAACTTTATGTTTGTAGGAATAGTTTTATTTAGGGATTTAATAATAAAACTATTAGATGCA
AGTTATGCTAGTTCAGCTATTATAGTTCCGTTTTTATTATTGTTACCTATAATGTATACTGTATCAGAATCAACTTGTTT
AGGCATATCTTTTTCAAGAAAGACATCTTACAATATAATAGTATCATTAATAGCAGCTGTGGTTAATTATATTTTAAATT
ATTTATTAGTTCCAAAGTATGGAGCTTTAGGAGCTTCCATAGCTACAGGAATAGCCTATACAGTATTCTTTTGGGTAAGA
ACACTTATATCAAGAAAGCTATGGTTTAAATTTAAACTAGGCTTTTATATATTAAATACAGCATCTATGTTATTATTAGC
ATCATTAGATGTGTTGTATAATAATATTTACATAGATATTGCTATAGCTTTGTTCATTGTATATATAAACAGAAATGAAG
TTAAATCTATTTTTTATTATATTAATATGTTTTTAAAAGACAGAAAAAATAAAGTGGTTGCTTAG

Upstream 100 bases:

>100_bases
AAATGAGAAGTGTAAAATATCTGTATTTATTTAACTATAATTTAGATGAAATAAAAATCAATATATATTAAGTTTTATTT
TATCTTAGGAGGAAACTAAT

Downstream 100 bases:

>100_bases
GAGGGTGAAAATGGAGTTTGAAATGCCAATTATAGATGTAGAAAAAGATATAAAAAGCAAAAAAATGCAGTTTATTATAA
AAAGATTTTTAGATATAGTA

Product: transporter

Products: NA

Alternate protein names: Exopolysaccharide Biosynthesis Protein; Exopolysacharide Protein Wzx; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Transporter; Flippase Wzx; Heteropolysaccharide Repeat-Containing Protein; Polysaccharide Transporter Protein; Polysaccharide Biosynthesis Family Protein; Capsule Biosynthesis Repeating Unit Flippase Wzx; O-Antigen Translocase; O-Antigen And Teichoic Acid Export Protein; Multi Anti Extrusion Protein MatE; Polysaccharide Biosynthesis Protein CpsL; Polysaccharide Biosynthesis Related Protein; Capsular Polysaccharide Repeating Unit Transporter CpsL; Cytosol Aminopeptidase; Polysaccharide Biosynthesis Transmembrane Protein; Polysaccharide Biosynthesis Protein Wzx; Lipopolysaccharide Biosynthesis Translocase; Polysaccharide Biosynthesis Protein-Like Protein

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSL
FWNSLIVPLIFSLILGFFYIICYQPLSVLMIDTVDRYIVVILAISLPFAVIDRFNLLLIRMEEKARLYSVLNVISKIINV
AVLIPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR
QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDA
SYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVR
TLISRKLWFKFKLGFYILNTASMLLLASLDVLYNNIYIDIAIALFIVYINRNEVKSIFYYINMFLKDRKNKVVA

Sequences:

>Translated_474_residues
MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSL
FWNSLIVPLIFSLILGFFYIICYQPLSVLMIDTVDRYIVVILAISLPFAVIDRFNLLLIRMEEKARLYSVLNVISKIINV
AVLIPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR
QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDA
SYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVR
TLISRKLWFKFKLGFYILNTASMLLLASLDVLYNNIYIDIAIALFIVYINRNEVKSIFYYINMFLKDRKNKVVA
>Mature_473_residues
SDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSLF
WNSLIVPLIFSLILGFFYIICYQPLSVLMIDTVDRYIVVILAISLPFAVIDRFNLLLIRMEEKARLYSVLNVISKIINVA
VLIPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMRQ
WSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDAS
YASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVRT
LISRKLWFKFKLGFYILNTASMLLLASLDVLYNNIYIDIAIALFIVYINRNEVKSIFYYINMFLKDRKNKVVA

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54445; Mature: 54314

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00027 HOMEOBOX_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIF
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHE
LGMDQSFTREFNSEEDKKSLFWNSLIVPLIFSLILGFFYIICYQPLSVLMIDTVDRYIVV
ECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAISLPFAVIDRFNLLLIRMEEKARLYSVLNVISKIINVAVLIPYLLYIDKSFKGIINA
HHHHHHHHHHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR
HHHHHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
NFMFVGIVLFRDLIIKLLDASYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNII
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
VSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVRTLISRKLWFKFKLGFYILNT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH
ASMLLLASLDVLYNNIYIDIAIALFIVYINRNEVKSIFYYINMFLKDRKNKVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIF
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHE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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA