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The map label for this gene is rfbP [H]

Identifier: 226950523

GI number: 226950523

Start: 3518668

End: 3519321

Strand: Reverse

Name: rfbP [H]

Synonym: CLM_3499

Alternate gene names: 226950523

Gene position: 3519321-3518668 (Counterclockwise)

Preceding gene: 226950524

Following gene: 226950522

Centisome position: 84.7

GC content: 25.54

Gene sequence:

>654_bases
ATGGAGTTTGAAATGCCAATTATAGATGTAGAAAAAGATATAAAAAGCAAAAAAATGCAGTTTATTATAAAAAGATTTTT
AGATATAGTACTATCCTTAATAGGAATAATTGTACTATCTCCAATATATTTAATTTTATTTTTATGGATAAAATTAGATT
CAAAGGGTCCAGCCTTATTTAAACAAGTTAGAGTTGGAAAAGATAATAAAGATTTTGTAATATACAAGTTTAGAACAATG
ATAGTAGATGCAGAAAAAAAGAAAAAGATAGATTTAGAAATAGAAGATATATCTAGCTTTGTTTTCCAAAGCAAAAGTGA
TAATAGAATTACAAAGACAGGAAAATTTTTAAGAAAAACTAGTTTAGATGAAATACCTCAATTATTTAATGTCTTAAAAG
GAAATATGACTTTAGTAGGTCCAAGACCAGAAATTCCAGATGTAGTTAAACATTATCCGAATGAGTATAATCAAAGATTA
TTAGTTGCACCAGGTATAACAGGTTTAGCACAAGTTAGTGGGCGTGGAGAAATAGAGCTAGGGAAAACTGTTTATTATGA
TTTAACCTATATAAAGAATTTTTCAATTTGGTATGATATAAAAATATTATTCCAAACAGTATTTAAAGTTTTTAAAAATG
AAGGTGCTTTTTAA

Upstream 100 bases:

>100_bases
ATTGTATATATAAACAGAAATGAAGTTAAATCTATTTTTTATTATATTAATATGTTTTTAAAAGACAGAAAAAATAAAGT
GGTTGCTTAGGAGGGTGAAA

Downstream 100 bases:

>100_bases
TATAAATTTAGTTTTAGTTAATTTAGCTTAAAAACTAAAGATAATTTAAATCTTTTATCCGATGACTACCCGCTCTAATA
CTCCCATCTTCTTCAAAGTG

Product: sugar transferase family protein

Products: NA

Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MEFEMPIIDVEKDIKSKKMQFIIKRFLDIVLSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISSFVFQSKSDNRITKTGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL
LVAPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEGAF

Sequences:

>Translated_217_residues
MEFEMPIIDVEKDIKSKKMQFIIKRFLDIVLSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISSFVFQSKSDNRITKTGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL
LVAPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEGAF
>Mature_217_residues
MEFEMPIIDVEKDIKSKKMQFIIKRFLDIVLSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISSFVFQSKSDNRITKTGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL
LVAPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEGAF

Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=204, Percent_Identity=42.156862745098, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: =2.7.8.6 [H]

Molecular weight: Translated: 25182; Mature: 25182

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEMPIIDVEKDIKSKKMQFIIKRFLDIVLSLIGIIVLSPIYLILFLWIKLDSKGPALF
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KQVRVGKDNKDFVIYKFRTMIVDAEKKKKIDLEIEDISSFVFQSKSDNRITKTGKFLRKT
HHHHCCCCCCCEEEEEEEEEEEECCHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHC
SLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRLLVAPGITGLAQVSGRGEIEL
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCEEE
GKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEGAF
CCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFEMPIIDVEKDIKSKKMQFIIKRFLDIVLSLIGIIVLSPIYLILFLWIKLDSKGPALF
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KQVRVGKDNKDFVIYKFRTMIVDAEKKKKIDLEIEDISSFVFQSKSDNRITKTGKFLRKT
HHHHCCCCCCCEEEEEEEEEEEECCHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHC
SLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRLLVAPGITGLAQVSGRGEIEL
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCEEE
GKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEGAF
CCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]