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The map label for this gene is 226950504

Identifier: 226950504

GI number: 226950504

Start: 3500581

End: 3501243

Strand: Reverse

Name: 226950504

Synonym: CLM_3480

Alternate gene names: NA

Gene position: 3501243-3500581 (Counterclockwise)

Preceding gene: 226950505

Following gene: 226950503

Centisome position: 84.26

GC content: 26.09

Gene sequence:

>663_bases
ATGAATAAAAATTTAGTAGATATAGATTGGAACAATATAGAGAAATATTCCCAAGAACAAATAACATACTTCTTATATCT
GGAAGGGAAAAGTATAGAAACTTTGTCTAAAATTAGGAATTTTGATAAAGCTACTGTAAAGAAACATATATTAGATGGTA
AGATTAAATATGGTATATTAGCTAAGAGTTCTAATGTAGAAGAATTATTTAAACAAATAGCTAACTCAGGAAAGCAGGAT
AAAATAGAAGTTATAAATGGACTAGAAAATAAAATAAAAAAGGATTTAATTTCTTTCATAAAAAATAATTATGGAGATAT
GTATCCTAAAGATAAACAAGCAGCGGTTTGGATTTTAGGAGAATTAAAAGATGAAGAGGGAGTTGATATACTTTTAAAAG
CATCAGTACATAAATTTATAAATATAAGGAGGATGGCAGTTTCAGCCTTAGGTAAAATAGGAAGTGTTAAAGGAGAAACT
ATTTTAATAAGGGCATTAGAAGATGAGAATTCTCAGGTCGTAACCTATGCTATAAAAGCCTTAAAAAAACTAAGAAGCAC
AAAAGCAAAGGAAAAAATTATATATATAAAAAATAAAACTGATAAAGATTATATATTAAAAGCAGTAGATGAATATTTAC
AAGAAATAGATGACCCTATATAG

Upstream 100 bases:

>100_bases
AAGATTAAATTAATATATAGATCCATTGTTCTTATGAATTTATATATATTAATTAAAAAAGATTTATATTAAGCTAAGTG
TTTTAAGAAAGGTGAGGAGT

Downstream 100 bases:

>100_bases
AAAAGAGGTATGCTGATGTCATATTTTACTATAAAAAACTTTGGAAAAGATGAATTTGAAGAAAAAAAGTCCACTTTTAT
AGGAAGAGCAAAAAGAGTTT

Product: PBS lyase HEAT-like repeat-containing protein

Products: NA

Alternate protein names: PBS Lyase HEAT-Like Repeat Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNKNLVDIDWNNIEKYSQEQITYFLYLEGKSIETLSKIRNFDKATVKKHILDGKIKYGILAKSSNVEELFKQIANSGKQD
KIEVINGLENKIKKDLISFIKNNYGDMYPKDKQAAVWILGELKDEEGVDILLKASVHKFINIRRMAVSALGKIGSVKGET
ILIRALEDENSQVVTYAIKALKKLRSTKAKEKIIYIKNKTDKDYILKAVDEYLQEIDDPI

Sequences:

>Translated_220_residues
MNKNLVDIDWNNIEKYSQEQITYFLYLEGKSIETLSKIRNFDKATVKKHILDGKIKYGILAKSSNVEELFKQIANSGKQD
KIEVINGLENKIKKDLISFIKNNYGDMYPKDKQAAVWILGELKDEEGVDILLKASVHKFINIRRMAVSALGKIGSVKGET
ILIRALEDENSQVVTYAIKALKKLRSTKAKEKIIYIKNKTDKDYILKAVDEYLQEIDDPI
>Mature_220_residues
MNKNLVDIDWNNIEKYSQEQITYFLYLEGKSIETLSKIRNFDKATVKKHILDGKIKYGILAKSSNVEELFKQIANSGKQD
KIEVINGLENKIKKDLISFIKNNYGDMYPKDKQAAVWILGELKDEEGVDILLKASVHKFINIRRMAVSALGKIGSVKGET
ILIRALEDENSQVVTYAIKALKKLRSTKAKEKIIYIKNKTDKDYILKAVDEYLQEIDDPI

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25216; Mature: 25216

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLVDIDWNNIEKYSQEQITYFLYLEGKSIETLSKIRNFDKATVKKHILDGKIKYGIL
CCCCEEECCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEE
AKSSNVEELFKQIANSGKQDKIEVINGLENKIKKDLISFIKNNYGDMYPKDKQAAVWILG
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
ELKDEEGVDILLKASVHKFINIRRMAVSALGKIGSVKGETILIRALEDENSQVVTYAIKA
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHH
LKKLRSTKAKEKIIYIKNKTDKDYILKAVDEYLQEIDDPI
HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKNLVDIDWNNIEKYSQEQITYFLYLEGKSIETLSKIRNFDKATVKKHILDGKIKYGIL
CCCCEEECCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEE
AKSSNVEELFKQIANSGKQDKIEVINGLENKIKKDLISFIKNNYGDMYPKDKQAAVWILG
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
ELKDEEGVDILLKASVHKFINIRRMAVSALGKIGSVKGETILIRALEDENSQVVTYAIKA
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHH
LKKLRSTKAKEKIIYIKNKTDKDYILKAVDEYLQEIDDPI
HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA