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The map label for this gene is selD [H]

Identifier: 226950401

GI number: 226950401

Start: 3408443

End: 3409408

Strand: Reverse

Name: selD [H]

Synonym: CLM_3372

Alternate gene names: 226950401

Gene position: 3409408-3408443 (Counterclockwise)

Preceding gene: 226950402

Following gene: 226950400

Centisome position: 82.05

GC content: 31.16

Gene sequence:

>966_bases
GTGCTCTCAAAAATACTTTCAAAATTACCTAAAATGGAAAGTGAAAATTTAATAGTAGGAATAGAAACTGCAGATGATGC
AGCAGTATATAAAATAAATGATGATACAGCTATGATACAGACATTAGATTTTTTTACACCTATAGTAGATGATCCATATA
TGTTCGGCCAAATAGCTGCAGCTAACTCTTTAAGCGATGTATATGCTATGGGAGGTAAGCCAGTAGTAGCATTGAATATA
GTTTGTTTTCCCTCATGTTTGCCTATAGAAGTTTTAGGCGAGATATTAAAAGGTGGAGCAGATAAGGTTATGGAATCAGG
GGCTGTAGTAATAGGAGGACATACTGTTGATGATAACGAGCCTAAATATGGTTTGTCAGTAACAGGTATTGTACATCCAG
ATAAAGTTTTAAAAAATTATGGATGTAAAGAGGGCGAAGTTTTAATTACTACAAAACCTTTAGGGATAGGTATTATAAAC
ACTGCTATAAAAGGAGATATGGCATCTAAAGAAGCAAAAGATGCAGCGGTAAAATCTATGAGTACTTTAAATAAATATGC
AGGGGAAATAATAACTAAATATAATATAAGTGCTTGTACGGATATTACTGGATTTGGTTTTCTAGGACATGCGTATGAGA
TGGCTAGTGCATCAAATGTTACTTTAAAATTTAACTATAAGAGAATATCTTATATAAAAGAAGCAGAGGAATATGCTGAA
TTTGGATTAGTTCCAGCAGGAGCTTACGCTAATAGAGATCATATCGAAGGAAATTTTGAGTTTAAAAATGTTCCTGTATT
TATGCAAGATATATTATTTGATCCTCAAACTTCAGGTGGATTATTAATTTCTTGTTCAAAAGAAGAGTCAGAAAAAATTA
TGAAAGAATTAAATAAATTGGAGTTAAAATCTTCTATTGTAGGAGAAGTTATAAGTAAACAAGATAAATATATAATAGTT
GAATAA

Upstream 100 bases:

>100_bases
AAATATTAAAGAAGGAGAAGCCTGTTCTATAGAGAAAAAAGAAGTAAGGCTTACAGAGCTTTCAAGAACATCAGGATGAG
CGGCTAAGATAGCGCCGGGA

Downstream 100 bases:

>100_bases
AATATTATACTATTTATGACAATAAGTATTGAATATACAACATAATTAAGGAATGGAGAATAGGGCATGGATAAAAAACA
ATTATTACGTAATTTACCTA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNI
VCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIIN
TAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAE
FGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVISKQDKYIIV
E

Sequences:

>Translated_321_residues
MLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNI
VCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIIN
TAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAE
FGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVISKQDKYIIV
E
>Mature_321_residues
MLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNI
VCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIIN
TAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAE
FGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVISKQDKYIIV
E

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI15011844, Length=297, Percent_Identity=30.3030303030303, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI24797148, Length=286, Percent_Identity=28.6713286713287, Blast_Score=105, Evalue=6e-23,
Organism=Escherichia coli, GI1788062, Length=326, Percent_Identity=38.3435582822086, Blast_Score=225, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17543426, Length=299, Percent_Identity=30.1003344481605, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24653602, Length=299, Percent_Identity=30.4347826086957, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24653604, Length=299, Percent_Identity=30.4347826086957, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28574119, Length=317, Percent_Identity=28.391167192429, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28574118, Length=218, Percent_Identity=33.4862385321101, Blast_Score=94, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 34798; Mature: 34798

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAA
CHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
ANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNE
HCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCC
PKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSM
CCCCEEEEEEECHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHH
STLNKYAGEIITKYNISACTDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAE
HHHHHHHHHHEEEECCCHHCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHH
FGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKL
HCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH
ELKSSIVGEVISKQDKYIIVE
HHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAA
CHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
ANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNE
HCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCC
PKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSM
CCCCEEEEEEECHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHH
STLNKYAGEIITKYNISACTDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAE
HHHHHHHHHHEEEECCCHHCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHH
FGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKL
HCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH
ELKSSIVGEVISKQDKYIIVE
HHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA