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The map label for this gene is 226949330

Identifier: 226949330

GI number: 226949330

Start: 2320947

End: 2321414

Strand: Direct

Name: 226949330

Synonym: CLM_2251

Alternate gene names: NA

Gene position: 2320947-2321414 (Clockwise)

Preceding gene: 226949329

Following gene: 226949339

Centisome position: 55.86

GC content: 37.82

Gene sequence:

>468_bases
ATGAGGATAGAACAAAAAATTAAAGAATTAGGCATTAAACTTCCTGAACTATCTACTCCCAAGGCAATGTATGTACCTGT
AAAGCAATTAGGAAATGCTCTATTTGTATCAGGGCAGGCACCCCTTGTTAATGGAGAACCTGCTTATACAGGAAAAGTTG
GTGAAGAAAGAACATTAGAGGAAGCACAAAAGGCAGCTGAAATCTGCACTATCAATATGCTAGCAGCAGTTAAGGAGTAC
CTTGGCGATTTAGATCGTGTTGTAAATGTAGTTAAAATTCAAGCTTTTGTTAACAGTAAAGTTGGATTTACCCAACAACA
TATTGTTGTAAATGCAGCTTCTCAGTTATTGTATGATGTGTTCGGCGATGCAGGACGTCATGCTCGCACGGCAGTTGGCA
CAAACCAGCTTCCACTGGATATTACTGTAGAAATTGAAGCTATTTTTGAAATCGAAACAAATAAATAA

Upstream 100 bases:

>100_bases
TATTGCAAATATTGTGGAGACAAAGTAACTATCAGCGGATCAGCTGCTTTGTATTCTATAGCTGATATTAAAATAAATTA
GAAGAAGAGGTTTGCATATT

Downstream 100 bases:

>100_bases
TATATAAGAGAATATCTCTTCTGTAAAGCCATAGCCATCCGTTAAAAACGGGTGGTTTACTCATCCCTATAAAATAATAA
TGTCGCCCATTTACAAATCT

Product: endoribonuclease family protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Translation Initiation Inhibitor Protein; L-PSP Family Endoribonuclease; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Transcriptional Regulator; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRIEQKIKELGIKLPELSTPKAMYVPVKQLGNALFVSGQAPLVNGEPAYTGKVGEERTLEEAQKAAEICTINMLAAVKEY
LGDLDRVVNVVKIQAFVNSKVGFTQQHIVVNAASQLLYDVFGDAGRHARTAVGTNQLPLDITVEIEAIFEIETNK

Sequences:

>Translated_155_residues
MRIEQKIKELGIKLPELSTPKAMYVPVKQLGNALFVSGQAPLVNGEPAYTGKVGEERTLEEAQKAAEICTINMLAAVKEY
LGDLDRVVNVVKIQAFVNSKVGFTQQHIVVNAASQLLYDVFGDAGRHARTAVGTNQLPLDITVEIEAIFEIETNK
>Mature_155_residues
MRIEQKIKELGIKLPELSTPKAMYVPVKQLGNALFVSGQAPLVNGEPAYTGKVGEERTLEEAQKAAEICTINMLAAVKEY
LGDLDRVVNVVKIQAFVNSKVGFTQQHIVVNAASQLLYDVFGDAGRHARTAVGTNQLPLDITVEIEAIFEIETNK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16938; Mature: 16938

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEQKIKELGIKLPELSTPKAMYVPVKQLGNALFVSGQAPLVNGEPAYTGKVGEERTLE
CCHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCEEEECCCCCEECCCCCCCCCCCCHHHHH
EAQKAAEICTINMLAAVKEYLGDLDRVVNVVKIQAFVNSKVGFTQQHIVVNAASQLLYDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FGDAGRHARTAVGTNQLPLDITVEIEAIFEIETNK
HCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MRIEQKIKELGIKLPELSTPKAMYVPVKQLGNALFVSGQAPLVNGEPAYTGKVGEERTLE
CCHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCEEEECCCCCEECCCCCCCCCCCCHHHHH
EAQKAAEICTINMLAAVKEYLGDLDRVVNVVKIQAFVNSKVGFTQQHIVVNAASQLLYDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FGDAGRHARTAVGTNQLPLDITVEIEAIFEIETNK
HCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA