Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
---|---|
Accession | NC_012563 |
Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is mcp3 [H]
Identifier: 226949339
GI number: 226949339
Start: 2334384
End: 2334608
Strand: Direct
Name: mcp3 [H]
Synonym: CLM_2262
Alternate gene names: 226949339
Gene position: 2334384-2334608 (Clockwise)
Preceding gene: 226949330
Following gene: 226949340
Centisome position: 56.18
GC content: 29.33
Gene sequence:
>225_bases ATGAGAGGATTGAAGGAAAAGAAAAACGAAAGCATTGACAAATTAATAGAATTTGAAGGTATTATAGAAAAGATAGTTAG CAATGCAAATAATGCTCAAAATTTTACAGATACTATACAATCAATATCTTCTCAAACTAATTTATTAGCACTTAATGCTT CTATAGAAGCTGCCAGAGCTGGTGAAGCTGGTAAAGGTTTTACAATAGTATCAGAATTTATGTAA
Upstream 100 bases:
>100_bases TAGTTTAGATTGTGTAGATTCAAGTATAAATAATATATCTAATAAAATTAATGAAGTAAATGATATAACTGAAAATAATA GTTTAAATGCCTTAGATGAA
Downstream 100 bases:
>100_bases ATGAAATTGTGCAAGGTGTAGAAGAAACTTCATCTATAGCTGAGGAAGTGACAGCTTCTGCTGAAGAACAATTTAATATG ACAAAGAAAGTATCTGACTT
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MRGLKEKKNESIDKLIEFEGIIEKIVSNANNAQNFTDTIQSISSQTNLLALNASIEAARAGEAGKGFTIVSEFM
Sequences:
>Translated_74_residues MRGLKEKKNESIDKLIEFEGIIEKIVSNANNAQNFTDTIQSISSQTNLLALNASIEAARAGEAGKGFTIVSEFM >Mature_74_residues MRGLKEKKNESIDKLIEFEGIIEKIVSNANNAQNFTDTIQSISSQTNLLALNASIEAARAGEAGKGFTIVSEFM
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 8047; Mature: 8047
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLKEKKNESIDKLIEFEGIIEKIVSNANNAQNFTDTIQSISSQTNLLALNASIEAARA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHC GEAGKGFTIVSEFM CCCCCCCHHHHHCC >Mature Secondary Structure MRGLKEKKNESIDKLIEFEGIIEKIVSNANNAQNFTDTIQSISSQTNLLALNASIEAARA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHC GEAGKGFTIVSEFM CCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]