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The map label for this gene is yjdF [H]

Identifier: 226949293

GI number: 226949293

Start: 2279479

End: 2279886

Strand: Reverse

Name: yjdF [H]

Synonym: CLM_2212

Alternate gene names: 226949293

Gene position: 2279886-2279479 (Counterclockwise)

Preceding gene: 226949295

Following gene: 226949292

Centisome position: 54.87

GC content: 27.21

Gene sequence:

>408_bases
ATGATTAAATTAACAGTTTTATTTGACGAACCTTTTTGGATAGGTATTTTTGAAAAACAGGATCAAGATAAAATTCAAAT
ATGTAGAGTGGTTTTTGGTCAGGAACCTAAAGACTATGAAGTATATGATTTTATCCTAAAAAATTATTACAATCTTAAGT
TTAGTAACCCAATAGCAATAGACAAAAATCCTAAGAAAGAAATTAATCCCAAAAGGATGCAAAGAAAAATTAAGAAAACA
GTACAGGAAAATGGTATTGGAACAAAGGCACAACAGGCTTTAAAACTTGATTATGAAAATAAAAAAACAGAAAGAAAGAT
TAGATCAAAGGAAGATCGTGAAAAATTAAAAAAACTTAAATTTGAAAAAAGACAGCAAAAGAAAGCTAAAAAGAAGAAGG
GCCATTAA

Upstream 100 bases:

>100_bases
TGATTCGGTTGGTAGTCCGAATGGGGTAATTAGCCCTCAGTAACCTGCCCTCCTGGGGTTGTCCATTCTCTAAATTTAGC
TGTACAACAGGAGGAGAAAA

Downstream 100 bases:

>100_bases
TATAAATACAACGAAAATTTTAAATGAATTTCCCTATTGGGTAAAATAACATCTAGCAATTATATGAATGGGGATGAAAA
AATGGTTATAGAAGTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIKLTVLFDEPFWIGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSNPIAIDKNPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYENKKTERKIRSKEDREKLKKLKFEKRQQKKAKKKKGH

Sequences:

>Translated_135_residues
MIKLTVLFDEPFWIGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSNPIAIDKNPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYENKKTERKIRSKEDREKLKKLKFEKRQQKKAKKKKGH
>Mature_135_residues
MIKLTVLFDEPFWIGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSNPIAIDKNPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYENKKTERKIRSKEDREKLKKLKFEKRQQKKAKKKKGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 16305; Mature: 16305

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTVLFDEPFWIGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSNPIAI
CEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEE
DKNPKKEINPKRMQRKIKKTVQENGIGTKAQQALKLDYENKKTERKIRSKEDREKLKKLK
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHH
FEKRQQKKAKKKKGH
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKLTVLFDEPFWIGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSNPIAI
CEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEE
DKNPKKEINPKRMQRKIKKTVQENGIGTKAQQALKLDYENKKTERKIRSKEDREKLKKLK
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHH
FEKRQQKKAKKKKGH
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]