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The map label for this gene is 226949295

Identifier: 226949295

GI number: 226949295

Start: 2280983

End: 2281852

Strand: Reverse

Name: 226949295

Synonym: CLM_2214

Alternate gene names: NA

Gene position: 2281852-2280983 (Counterclockwise)

Preceding gene: 226949297

Following gene: 226949293

Centisome position: 54.91

GC content: 29.2

Gene sequence:

>870_bases
ATGAGATATGAAGGCGATATATATAGACCACCTAGTGAAGCAAATAGTTTAATTTTACAAATTACTATAGGTTGTTCTCA
TAATAAATGTAGTTTTTGTTCTATGTATAAAAATGAGAAGTTTAGAGTAAGAAATTTAGAGGAAATATTTGAAGATTTAG
AGGAAAGTAAATCATATTATAGAAGAATAAATAGAATATTTTTGGCAGATGGAGATGCACTTTGCCTAAAAACAGAAACC
TTAAAAAAGATACTATTAAAAATAAAGGATACTCATCCTCAATGTGAAAGAGTTGGTATATATGCTACAGCTAAGGATGT
ATTAAGAAAATCTATAGAAGAATTAAAAGAGCTTAGAGAATTAGGCTTAGGAATAGTTTATATGGGATTAGAAAGTGGTA
GTCCAGAAATTTTAGAGGACATAAATAAGGGAGTTAAAGTTGAGGAATATATAGAAGCTTCTAAAAAAGCAAGAGCCAGT
GGTATAAAATCATCCATAACTGTAATATCTGGCCTTGGAGGAAAAGAAAAATGGCAACAGCATGCTACAGAAACAGGCAA
AGCATTATCTTTAATAGATCCAGATTATGTTGGTTTATTAACCCTTCTTTTAGATGAGGGTACAGAAATGACTGAACAGG
TGAAAAGAGGAGAAATTACTTTGTTAAAACCGGAAGAGGTCATGGAAGAAACAAAATTAATGCTAGAAAACATGAATGTA
ACTAATTGTATATTCAGAAGTAATCATGCCTCTAATTATGTAGCATTAAGAGGTACTCTGCCTAGAGATAAAGAAAAATT
AATAAATATAATAGGAAATATATTAAAAAGAGATTTTTATTATAAAGAGGATATATATAGATTGTTATAG

Upstream 100 bases:

>100_bases
ACTAAAAAACTTAGAAAAGGTAAAGTTTTTAGTATAGAACAAAAGATAAAATTTTTTATGAATAGATGAGAGTATTTGAA
GCGGAGGTATTGAAAAGTTT

Downstream 100 bases:

>100_bases
GATTAATTTAAATAAACTATATTAAAAATTAAAAATAGATATTAAGGGTATATTAATAAAAATATTGATAAAGTATGAAT
TCAAGCAGCAAGTTTAGAAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Fe-S Oxidoreductase Family Protein; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRNLEEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL

Sequences:

>Translated_289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRNLEEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
>Mature_289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRNLEEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33085; Mature: 33085

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRNLEEIFEDLEESKSYY
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHCCHHHHHHHHHHHHHHH
RRINRIFLADGDALCLKTETLKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRE
HHHHEEEEECCCEEEEEHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHH
LGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWQQ
CCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
HATETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
HHHHCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCH
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
HHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRNLEEIFEDLEESKSYY
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHCCHHHHHHHHHHHHHHH
RRINRIFLADGDALCLKTETLKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRE
HHHHEEEEECCCEEEEEHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHH
LGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWQQ
CCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
HATETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
HHHHCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCH
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
HHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA