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The map label for this gene is 226949141

Identifier: 226949141

GI number: 226949141

Start: 2122049

End: 2122510

Strand: Reverse

Name: 226949141

Synonym: CLM_2059

Alternate gene names: NA

Gene position: 2122510-2122049 (Counterclockwise)

Preceding gene: 226949142

Following gene: 226949140

Centisome position: 51.08

GC content: 26.41

Gene sequence:

>462_bases
GTGGCAAGACCAAGACAACCTATAAATTTATTACAAGAGAAAGGTAAAAAGCATTTAACAAAGGAAGAAATTGAAAAAAG
AAAAAATGGTGAGATAGAAGTAAACAGCGACAATGTTGTTGCACCTTCTTATCTTACCAAAAAACAAAAACAAACATTTG
AATGGTATGCAGAAGAATTAAAAAAGATAAATATAATTGCAAATATTGATGTAGAGGGTTTAGCACGATATATCGTCGCT
GAAGAACAATTTAAGAAGATTGCTAAAAAAATAAAAAATACAAATATTTTAGATGATGATTATGATAAGTTACTGTTAAA
ATTAGAAAAATTAAATAAAATTTGTAGACAAGGAGCAACTGATTTAGGATTAACTATTTCTAGTAGATGTAAGTTGGTAA
TACCAAAAAAAGAAGAAAAACCAAAGAATAAATTTGAGAAATTTGGTGTTAAAGATGTTTAA

Upstream 100 bases:

>100_bases
GTTAGATCTCTATAGATATTTATTAAAAAGTCCGTGGTCGCAGTGTTTTTCCGTAAAAACTCCCTAAATGAAAATTTTTG
ATGAAAGTGAGGTGTAGAAG

Downstream 100 bases:

>100_bases
AGACCGAGTTACCCAATATTGTTATGATGTATTAAATAATAAATTAATTGCTGGTAAATCTGTTAAATTAGCTTGTCAAA
GACATTTAGAAGATTTAGAA

Product: phage terminase small subunit, P27 family

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MARPRQPINLLQEKGKKHLTKEEIEKRKNGEIEVNSDNVVAPSYLTKKQKQTFEWYAEELKKINIIANIDVEGLARYIVA
EEQFKKIAKKIKNTNILDDDYDKLLLKLEKLNKICRQGATDLGLTISSRCKLVIPKKEEKPKNKFEKFGVKDV

Sequences:

>Translated_153_residues
MARPRQPINLLQEKGKKHLTKEEIEKRKNGEIEVNSDNVVAPSYLTKKQKQTFEWYAEELKKINIIANIDVEGLARYIVA
EEQFKKIAKKIKNTNILDDDYDKLLLKLEKLNKICRQGATDLGLTISSRCKLVIPKKEEKPKNKFEKFGVKDV
>Mature_152_residues
ARPRQPINLLQEKGKKHLTKEEIEKRKNGEIEVNSDNVVAPSYLTKKQKQTFEWYAEELKKINIIANIDVEGLARYIVAE
EQFKKIAKKIKNTNILDDDYDKLLLKLEKLNKICRQGATDLGLTISSRCKLVIPKKEEKPKNKFEKFGVKDV

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17769; Mature: 17638

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRQPINLLQEKGKKHLTKEEIEKRKNGEIEVNSDNVVAPSYLTKKQKQTFEWYAEEL
CCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEECCHHHHHHHHHHHHHHHHHH
KKINIIANIDVEGLARYIVAEEQFKKIAKKIKNTNILDDDYDKLLLKLEKLNKICRQGAT
HHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
DLGLTISSRCKLVIPKKEEKPKNKFEKFGVKDV
CCCEEECCCCEEECCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
ARPRQPINLLQEKGKKHLTKEEIEKRKNGEIEVNSDNVVAPSYLTKKQKQTFEWYAEEL
CCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEECCHHHHHHHHHHHHHHHHHH
KKINIIANIDVEGLARYIVAEEQFKKIAKKIKNTNILDDDYDKLLLKLEKLNKICRQGAT
HHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
DLGLTISSRCKLVIPKKEEKPKNKFEKFGVKDV
CCCEEECCCCEEECCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA