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The map label for this gene is 226949142

Identifier: 226949142

GI number: 226949142

Start: 2122646

End: 2123050

Strand: Reverse

Name: 226949142

Synonym: CLM_2060

Alternate gene names: NA

Gene position: 2123050-2122646 (Counterclockwise)

Preceding gene: 226949143

Following gene: 226949141

Centisome position: 51.09

GC content: 23.21

Gene sequence:

>405_bases
ATGTGTGATGAATGTAAGAATAAATATGATAAGAGTAAGAAAGAAAGCTATAAAGAATATAAGAAGAATAGAAAAGATAA
TAGAGAACAGAAGTTTTATTCTAGTAAGGAATGGATAATAGTAAGAGATATAGTAAGAAGAAAGTATAATAATATATGTT
TATATAGTTATTATATATTACATGAAATTAAATATGTAGATTATATACATCATATTATAGAGCTTAAAGAAGATTGGGAT
AAGAAATTAGATAAAGATAATCTTATTCCTTTATCTGATAAAGTTCATAAGATAGTGCATAGAGAATATGATAGGAGTGC
TAAGGATAAGAAACAAATGCAAGAACTATTAAGAGAACTAAAAAGAAAATATGAAAAGGAATTTGGTACTAATTTAAAAA
GTTAG

Upstream 100 bases:

>100_bases
AGTATAAAAAGAAATATAGAAGTAATTATATAGGAAGGTGATTGATATTGCTTTAAAGAAATTATGCAGGTGTGGAAAAG
TAATAGACTATAATAAAAGA

Downstream 100 bases:

>100_bases
TGCTTTTTTATTTTTTGAATTAATCCCCCCCCACGGTTAGATCTCTATAGATATTTATTAAAAAGTCCGTGGTCGCAGTG
TTTTTCCGTAAAAACTCCCT

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MCDECKNKYDKSKKESYKEYKKNRKDNREQKFYSSKEWIIVRDIVRRKYNNICLYSYYILHEIKYVDYIHHIIELKEDWD
KKLDKDNLIPLSDKVHKIVHREYDRSAKDKKQMQELLRELKRKYEKEFGTNLKS

Sequences:

>Translated_134_residues
MCDECKNKYDKSKKESYKEYKKNRKDNREQKFYSSKEWIIVRDIVRRKYNNICLYSYYILHEIKYVDYIHHIIELKEDWD
KKLDKDNLIPLSDKVHKIVHREYDRSAKDKKQMQELLRELKRKYEKEFGTNLKS
>Mature_134_residues
MCDECKNKYDKSKKESYKEYKKNRKDNREQKFYSSKEWIIVRDIVRRKYNNICLYSYYILHEIKYVDYIHHIIELKEDWD
KKLDKDNLIPLSDKVHKIVHREYDRSAKDKKQMQELLRELKRKYEKEFGTNLKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16776; Mature: 16776

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDECKNKYDKSKKESYKEYKKNRKDNREQKFYSSKEWIIVRDIVRRKYNNICLYSYYIL
CCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
HEIKYVDYIHHIIELKEDWDKKLDKDNLIPLSDKVHKIVHREYDRSAKDKKQMQELLREL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KRKYEKEFGTNLKS
HHHHHHHHCCCCCC
>Mature Secondary Structure
MCDECKNKYDKSKKESYKEYKKNRKDNREQKFYSSKEWIIVRDIVRRKYNNICLYSYYIL
CCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
HEIKYVDYIHHIIELKEDWDKKLDKDNLIPLSDKVHKIVHREYDRSAKDKKQMQELLREL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KRKYEKEFGTNLKS
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA