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The map label for this gene is yaaJ [C]

Identifier: 226948910

GI number: 226948910

Start: 1848816

End: 1850066

Strand: Direct

Name: yaaJ [C]

Synonym: CLM_1820

Alternate gene names: 226948910

Gene position: 1848816-1850066 (Clockwise)

Preceding gene: 226948908

Following gene: 226948911

Centisome position: 44.49

GC content: 27.02

Gene sequence:

>1251_bases
TTGCCCTTTATAATAATTGCAACTTTATATGTAAATTATAAAAGAAAAAAATTTTTTAATGTAATAAGCAAAAAAGATTC
TACTAAGATAGAATTTAATAAAGTAAAAAATGCTCTTTCAATTTCATTATCTTCAAAGATCGGTACAGGAGCTGTAATAG
GAGTATTAGCTGCCATGTGGAAAACTTCCCAAAATGGTATAGGTGGAGAGGCGGTAGTGCTTTGGGTTATTATTGGCATG
ATTTTACTCATTCCATTAACTTATTCAGAGGTTTTTTTTACTCAAGTAATAAATAAAACTCCAAGGAATTTTATAGAGCG
GTATATTAATAAAAAAGTTGCAGCTATTTATGCAGTATCCTTAGTTATATTGTATTCTTTTGGATTTACAGGATTTCAAA
TGACAGGGGTTCAGAGTGTAGTTAAAATTTTTGCTAAACAAAATTTCAACTATAACTTTACAACTAAAGGTAGATTAATT
TTTATAGTTATACCAATTATAGTTATAGTATCTTTTATAGTTTTAACCAAAAGCTATAAACTTTTTATTAATGTATTAGG
TTCTCTTGTTTCTTTATTAATTATTTTATATGCAGGATTTTTTTTAGTATTTTTATTTATAACAAGGAGTTTTATACCAG
AGTATTTATCTATAATTTGGAGAGATTTTTTAAATTTTAGAACTGCAGCCACAGGTATTCCTATAGGACTTATTGTGGGA
TTCCAAAGGATTATCCAAGTAAGTGAAACAGGATTAGGAACAAGTGCTTTAGCTAGTTCAGATATGATGAATTCTCCCAG
GAGAGAAGCTATGCTTCAGACCATTGCAACTATTATTACTATATGTAATGCAATTATAATAACGTCCTATGTATTTACTT
ATGGAAGATACAATCTTAACGGAGTAGTTTTATCAGGAGATGGATTAGATAGAATTGCTAGTTATTTAAATAGTGCTTAT
GGAGTTACAGGTTTTTTAGGACAAAGTATAATAATTATGTTTTTTTTAACCTGTGGTTTTACTACAGTTTTAAGTTCCTA
TCATTTTATTAATACAATTATTTATTTTAATGAAAATAAGAGGATAGCATTTTATATATGCTTAGTAACAGCTTCTGGAA
TATTAAGTGTATCAAATTTTGATATGATTTTTGATGCAGTGGATTTATTGATGTTCATTGTAGCAACAATAAACATAACT
GCCCTTTGTATATTTGTATATAAGGATATACAAAATTATAAAATTAAGTAA

Upstream 100 bases:

>100_bases
TACATTTGTATAAAAATAAATAGGGAAGGGGGGGATAAGTATAATTAACATATTTGGAGAAGCAGTAAATTTTTTAAGTA
CAAATTTATGGAACATTTTT

Downstream 100 bases:

>100_bases
TCAATAAGTTTTATTTATAAATACAGCCATTATAAGGGGCTTAATACCTTGTACAATATATTTTAATGGAGGTATAAATT
ATGAGCAAAAAATATTTAAT

Product: sodium:alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGM
ILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLI
FIVIPIIVIVSFIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRTAATGIPIGLIVG
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAY
GVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKRIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINIT
ALCIFVYKDIQNYKIK

Sequences:

>Translated_416_residues
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGM
ILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLI
FIVIPIIVIVSFIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRTAATGIPIGLIVG
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAY
GVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKRIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINIT
ALCIFVYKDIQNYKIK
>Mature_415_residues
PFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGMI
LLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLIF
IVIPIIVIVSFIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRTAATGIPIGLIVGF
QRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAYG
VTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKRIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINITA
LCIFVYKDIQNYKIK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46542; Mature: 46411

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMW
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
KTSQNGIGGEAVVLWVIIGMILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLIFIVIPIIVIVSFIVLTKSYK
HHHHHHCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
LFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRTAATGIPIGLIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLN
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
GVVLSGDGLDRIASYLNSAYGVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENK
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
RIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINITALCIFVYKDIQNYKIK
EEEEEEEEEHHCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMW
CEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHH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EEEEEEEEEHHCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA