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The map label for this gene is yedE [H]

Identifier: 226948908

GI number: 226948908

Start: 1847103

End: 1847630

Strand: Direct

Name: yedE [H]

Synonym: CLM_1818

Alternate gene names: 226948908

Gene position: 1847103-1847630 (Clockwise)

Preceding gene: 226948907

Following gene: 226948910

Centisome position: 44.45

GC content: 30.3

Gene sequence:

>528_bases
ATGAAATGCATAAAGGATAGATTAAAAAAGCCCTGGCCTTATTGGATAGGTGGGATCTTACTAGGTATTTTAAATGTAAC
TCTTTTAGCAACAACGGGGGTTGCGTGGCATGTCACTAGTGGGTTTTTGCTATGGGGTGCAGCAGTATTAGACTTTTTAG
GAGCTGAACCATTGAAGTGGAACTTTTTTCATATATTTAATATACAATATAAGGAAATATTATTAGATCATAGTTTAGTT
ATAAATAAATTTACTATTTTAAATATAGCCGTTATTATGGGATCCTTAATGGCGACCTTATTTGCTTCTCAATTTAATAT
AAAAAAAATCAAAAATAAAAAGCAAGTAATTATTGCTTTAATAGGTGGCATAATTATGGGTTATGGAGCTAGGCTTGCTT
CAGGATGCAATATTGGTAGTTTTTTAATAGGTATATCATCTTTTTCTTTACATGGTTGGATATATTGGATTTTTATTACT
TTAGGAGCCTTTGTAGGTACGCTAATATTAAAGAAGTTTATATTATAA

Upstream 100 bases:

>100_bases
AGGAGTGGGCAAAACAAAATAACTATGAAATAAAAGTAATTGAAGTGGACAATGGTGAATGGGAAGTTTATATTCAAAAA
TAATAAAAAGGGGATAAAAT

Downstream 100 bases:

>100_bases
AATAGATAATATAAACTTCTTTAATTTTTATTAGCAGAATCCCCTTTTTCTAGATATTATAAAATCAACAAACATTTTTT
CATATTTGGTAAATACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKCIKDRLKKPWPYWIGGILLGILNVTLLATTGVAWHVTSGFLLWGAAVLDFLGAEPLKWNFFHIFNIQYKEILLDHSLV
INKFTILNIAVIMGSLMATLFASQFNIKKIKNKKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFVGTLILKKFIL

Sequences:

>Translated_175_residues
MKCIKDRLKKPWPYWIGGILLGILNVTLLATTGVAWHVTSGFLLWGAAVLDFLGAEPLKWNFFHIFNIQYKEILLDHSLV
INKFTILNIAVIMGSLMATLFASQFNIKKIKNKKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFVGTLILKKFIL
>Mature_175_residues
MKCIKDRLKKPWPYWIGGILLGILNVTLLATTGVAWHVTSGFLLWGAAVLDFLGAEPLKWNFFHIFNIQYKEILLDHSLV
INKFTILNIAVIMGSLMATLFASQFNIKKIKNKKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFVGTLILKKFIL

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=150, Percent_Identity=32.6666666666667, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 19503; Mature: 19503

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCIKDRLKKPWPYWIGGILLGILNVTLLATTGVAWHVTSGFLLWGAAVLDFLGAEPLKW
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCC
NFFHIFNIQYKEILLDHSLVINKFTILNIAVIMGSLMATLFASQFNIKKIKNKKQVIIAL
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHH
IGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFITLGAFVGTLILKKFIL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKCIKDRLKKPWPYWIGGILLGILNVTLLATTGVAWHVTSGFLLWGAAVLDFLGAEPLKW
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCC
NFFHIFNIQYKEILLDHSLVINKFTILNIAVIMGSLMATLFASQFNIKKIKNKKQVIIAL
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHH
IGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFITLGAFVGTLILKKFIL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]