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The map label for this gene is 226948883

Identifier: 226948883

GI number: 226948883

Start: 1825848

End: 1826843

Strand: Direct

Name: 226948883

Synonym: CLM_1793

Alternate gene names: NA

Gene position: 1825848-1826843 (Clockwise)

Preceding gene: 226948880

Following gene: 226948884

Centisome position: 43.94

GC content: 30.32

Gene sequence:

>996_bases
ATGAAAAAAATAGGATTAACAACCACAGTACCGGTGGAAGTGCTTATTGCAGCAGGGTATACACCAGTAGATTTAAATAA
TATATTTATTACCTCAGAGGATTATTTAAAATACATAGATATAGCTGAAAGAGATGGTTTCCCCAAAAGCTTATGTGCTT
GGATAAAGGGTATTTATGGAGCATGCCTAGAAAATAATATTAAAGAAATAGTTGGAGTTATGGAGGGGGATTGTTCTAAC
ACTAAAGCCCTCATTGAGGTTTTTAAACTAAGAGGAATAAAAATTTATCCATTTTCATTTCCCCATAGCCATAATTTAAA
GGATGTAGAAATTGAAATAAGAAAGTTCATGGATATCTTCAATGTTAACGAGGATAAGGTAGAACAGGTTAGAAAAAGAT
TAAATAGAGTTAGGAAGCTAGCAAAAAAAATAGATGAAATGACTTATATAGATAATAAGGTTAATGGTTTTGAAAACCAT
CTATATCAGGTGAGTTCAAGTGACTTTAATGGAAACATAGATGAATTTGAAGAACACCTTAAAAAAGTCATTGAGGGTAT
GGAGAAAAGAGAGTCAATAAATAAAAAATTAAGATTAGGCTATATAGGAGTTCCTCCAATGACTGGAGATATATATGAGT
TTAGTGAAAAATTAAATGCTCATTTTGTATATAACGAAGTTCAAAGAGAATTTGCTTTTCCTAGGGGGATAGAAGCTGCA
AATATATTTGAACAGTATTATAATTACACCTATCCTTATGATAATGAGTTTAGAATTAAGGAATTGAAAAAGCAAATAGA
AAAGAGAAAGATAGATGCTATAATTCACTACACTCAGGCTTTTTGCCATAGAGCTGTTGAAGATATAGTATTAAAAGAAG
AATTAAATATTCCTATGTTAAATATTGAAGGTGATAAGTTAAATACATTAGATGCAAGAACTAAACTAAGATTAGAAGCC
TTTCTGGATATGTTGCTGGACTTAAAGCATAAGTAA

Upstream 100 bases:

>100_bases
AATAAATAATAATTTATCATAACCATTATAACTTTTTAATGTTTTTAAGTCTAAGTTAGTGTAATAGATTGAAAAATCTA
TAGCGCAAGGAGGAATGAAA

Downstream 100 bases:

>100_bases
TAGGTGATCTAGTAAGAATTTTTATCTTAATATATTTTTGGATTTAAAGCAAAAGTAACAGACAGTATATAAAAGAAGTT
CATGTTTTCTTTATATTTAA

Product: 2-hydroxyglutaryl-CoA dehydratase subunit D

Products: NA

Alternate protein names: Benzoyl-CoA Reductase/2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-Coa Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit D

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKKIGLTTTVPVEVLIAAGYTPVDLNNIFITSEDYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHNLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSSSDFNGNIDEFEEHLKKVIEGMEKRESINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKHK

Sequences:

>Translated_331_residues
MKKIGLTTTVPVEVLIAAGYTPVDLNNIFITSEDYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHNLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSSSDFNGNIDEFEEHLKKVIEGMEKRESINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKHK
>Mature_331_residues
MKKIGLTTTVPVEVLIAAGYTPVDLNNIFITSEDYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHNLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSSSDFNGNIDEFEEHLKKVIEGMEKRESINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKHK

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38699; Mature: 38699

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLTTTVPVEVLIAAGYTPVDLNNIFITSEDYLKYIDIAERDGFPKSLCAWIKGIYG
CCCCCCCCCCHHHHHEECCCCCEECCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ACLENNIKEIVGVMEGDCSNTKALIEVFKLRGIKIYPFSFPHSHNLKDVEIEIRKFMDIF
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
NVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENHLYQVSSSDFNGNIDEFEEHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCHHHHHHHH
KKVIEGMEKRESINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
HHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPML
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NIEGDKLNTLDARTKLRLEAFLDMLLDLKHK
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGLTTTVPVEVLIAAGYTPVDLNNIFITSEDYLKYIDIAERDGFPKSLCAWIKGIYG
CCCCCCCCCCHHHHHEECCCCCEECCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ACLENNIKEIVGVMEGDCSNTKALIEVFKLRGIKIYPFSFPHSHNLKDVEIEIRKFMDIF
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
NVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENHLYQVSSSDFNGNIDEFEEHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCHHHHHHHH
KKVIEGMEKRESINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
HHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPML
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NIEGDKLNTLDARTKLRLEAFLDMLLDLKHK
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA