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The map label for this gene is yhjB [C]

Identifier: 226948880

GI number: 226948880

Start: 1823262

End: 1823429

Strand: Direct

Name: yhjB [C]

Synonym: CLM_1788

Alternate gene names: 226948880

Gene position: 1823262-1823429 (Clockwise)

Preceding gene: 226948878

Following gene: 226948883

Centisome position: 43.88

GC content: 25.6

Gene sequence:

>168_bases
TTGGAAATATTATTTAAAGGAGCTTCAAATAAGCAGATTGGAGAAAGACTAAATATATCTTTAGTAACGGTAAAAACTCA
TATGATTAATATATATTCTAAGCTTCAGGTTCCTGATAGAGTACAAGCTGTAGAGAAATATAAAAAAATTAAAGCCATAA
AATATTAA

Upstream 100 bases:

>100_bases
AAATAATGGCATTAAAAATCAACCTTTAAAATCAACCGAAAGGTTGATTTTTTTATGAGAAATTTTCGTATCATAAAAAT
ATGAAAGGGAGAAGGAAGTG

Downstream 100 bases:

>100_bases
TACTTAAAGTAGTAATATTTTATGGCAACTAGCTTAGTATATTAATATTAAGCTAGTTTTTTTATAAAATTCATAGTTTT
TATTTGATAGCTACATAGAT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MEILFKGASNKQIGERLNISLVTVKTHMINIYSKLQVPDRVQAVEKYKKIKAIKY

Sequences:

>Translated_55_residues
MEILFKGASNKQIGERLNISLVTVKTHMINIYSKLQVPDRVQAVEKYKKIKAIKY
>Mature_55_residues
MEILFKGASNKQIGERLNISLVTVKTHMINIYSKLQVPDRVQAVEKYKKIKAIKY

Specific function: Unknown

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6378; Mature: 6378

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILFKGASNKQIGERLNISLVTVKTHMINIYSKLQVPDRVQAVEKYKKIKAIKY
CCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEILFKGASNKQIGERLNISLVTVKTHMINIYSKLQVPDRVQAVEKYKKIKAIKY
CCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA