Click here to switch to the map view.

The map label for this gene is 226948308

Identifier: 226948308

GI number: 226948308

Start: 1230159

End: 1230596

Strand: Reverse

Name: 226948308

Synonym: CLM_1188

Alternate gene names: NA

Gene position: 1230596-1230159 (Counterclockwise)

Preceding gene: 226948315

Following gene: 226948301

Centisome position: 29.62

GC content: 28.08

Gene sequence:

>438_bases
ATGAATTTTAAGGAAATAACAATATCAGATATAAAAGAAATTGCAGATATGTATGTTACTACATTTAATTCTTCACCCTG
GAATGATGAATGGACAATTGAAACTGCCTCAAAACGCTTATATCAAATGATAAATTGTGAATCTTCCTATGGGCTTGTAG
CATATGAAGATAAATTAATTTGTGGAATGATTTTAGGAAGTGAAGAACAGTATTATAATAGTGTAATGTTCAATATTAAA
GAATTTTGTGTAAGAAATGATGTACGTAGCAAAGGTTTTGGCACAAAAATTTTTGAAGAATTTGAAAATCGTTTGAAAAA
TAGGGGAATAACTGAAATTATCTTACTTACATCAAGAGACGACCGTACAGAAGGATTTTATAAGAAAAAAGGCTTGAAAT
CATATAATGAAATGGTTTTGATGGGTAAACAAATTTAA

Upstream 100 bases:

>100_bases
TGTACTCATATAAATATGATATAATTACCATTAGTTAAATTAACATAATGAGAAAATAAAAAACAATATAATATAAATGT
GACCTAAAGGAGGACTAGCT

Downstream 100 bases:

>100_bases
TTACATAGCTTAAATTATACATCAATCAAAACATAAGAATCATCATAAATTGAAATGCCACTATTCCTCTTTCGTGATTC
TTATTGTTTTGTTTTTGTTG

Product: GNAT family acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Spermine/Spermidine Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase Gnat Family

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMINCESSYGLVAYEDKLICGMILGSEEQYYNSVMFNIK
EFCVRNDVRSKGFGTKIFEEFENRLKNRGITEIILLTSRDDRTEGFYKKKGLKSYNEMVLMGKQI

Sequences:

>Translated_145_residues
MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMINCESSYGLVAYEDKLICGMILGSEEQYYNSVMFNIK
EFCVRNDVRSKGFGTKIFEEFENRLKNRGITEIILLTSRDDRTEGFYKKKGLKSYNEMVLMGKQI
>Mature_145_residues
MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMINCESSYGLVAYEDKLICGMILGSEEQYYNSVMFNIK
EFCVRNDVRSKGFGTKIFEEFENRLKNRGITEIILLTSRDDRTEGFYKKKGLKSYNEMVLMGKQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17018; Mature: 17018

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMINCESSYGLVAYEDKLI
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCEE
CGMILGSEEQYYNSVMFNIKEFCVRNDVRSKGFGTKIFEEFENRLKNRGITEIILLTSRD
EEEEECCCHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
DRTEGFYKKKGLKSYNEMVLMGKQI
CCCCHHHHHHCHHHHHHHHCCCCCC
>Mature Secondary Structure
MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMINCESSYGLVAYEDKLI
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCEE
CGMILGSEEQYYNSVMFNIKEFCVRNDVRSKGFGTKIFEEFENRLKNRGITEIILLTSRD
EEEEECCCHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
DRTEGFYKKKGLKSYNEMVLMGKQI
CCCCHHHHHHCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA