| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is thiJ [C]
Identifier: 226948301
GI number: 226948301
Start: 1223853
End: 1224437
Strand: Reverse
Name: thiJ [C]
Synonym: CLM_1181
Alternate gene names: 226948301
Gene position: 1224437-1223853 (Counterclockwise)
Preceding gene: 226948308
Following gene: 226948299
Centisome position: 29.47
GC content: 32.31
Gene sequence:
>585_bases ATGAAAAAAGTATTATTACTTCTTGCTGATGGTTTTGAAGCTATAGAAGCAAGTGTTCTTACAGATGTTATAGGATGGAA CAAATTAGAAGGTGATGGTACCACAGAATTAATAACTGTTGGAATAAGAGAAAAATTAAAATGTACTTTTAATTTCACAG TAACCCCTGAAATGCATGTCAGTGAAGTTAATATTGATGAATTTGATGCACTTGCAATACCAGGTGGATTTGAAGAAGCA GGATTTTATGAAGATGCTTATAGCGAAGATTTTTTAAACATAATTAGAGAATTTGACAAAATAGGAAAAACAATAGCTTC TATTTGTGTTGGTGCACTACCTATTGGGAAAAGTGGAGTGCTAGTTAATAGAAATGCCACAACTTATAATTTAGGAAATG GTAAAAGGCAAAAACAATTATCTGAATTTGGTGCAAATGTTCTTCGTGATGAACCTGTTGTTGTAGATAAAAATATAATC ACTTCCTACAATCCTTCAACTGCTTTCCATGTAGCTTTCAAACTTTTAGAGCTGCTCACCTCTAAAGAAAACTGTGTTAA TGTTAAAAGGCTAATGGGGTTTTAG
Upstream 100 bases:
>100_bases ATTATTAATTTCATTTATTTCAATTTTACTGATAGCACATATAGCATTATACTTAAGAAAAACAAATCTAAAATATATAA TTAAAAGGAGATATTAAAGT
Downstream 100 bases:
>100_bases CAAAATAATAAAGTACTAAATCTACTATATTAGAACAAAAGCAATATTCTTAAGGGACGTAACAAGGACTTACTTTTTTA TGGTGGGTCCTATTTTATTA
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: Intracellular Protease/Amidase; DJ-1/PfpI Family Protein; Protease; Protein ThiJ; ThiJ/PfpI Domain Protein; ThiJ/PfpI Domain-Containing Protein; Thij/Pfpi DomaiN-Containing Protein; Protease I; Protease DJ-1/PfpI Family; Metal Dependent Phosphohydrolase; Dj-1/Pfpi Family; ThiJ/PfpI Family Protein; Intracellular Protease PfpI Family
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKVLLLLADGFEAIEASVLTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKIGKTIASICVGALPIGKSGVLVNRNATTYNLGNGKRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Sequences:
>Translated_194_residues MKKVLLLLADGFEAIEASVLTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKIGKTIASICVGALPIGKSGVLVNRNATTYNLGNGKRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF >Mature_194_residues MKKVLLLLADGFEAIEASVLTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKIGKTIASICVGALPIGKSGVLVNRNATTYNLGNGKRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Specific function: Thiamine biosynthesis [C]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI28571932, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653499, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21371; Mature: 21371
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLLLADGFEAIEASVLTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAIPGGFEEAGFYEDAYSEDFLNIIREFDKIGKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVNRNATTYNLGNGKRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC >Mature Secondary Structure MKKVLLLLADGFEAIEASVLTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAIPGGFEEAGFYEDAYSEDFLNIIREFDKIGKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVNRNATTYNLGNGKRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA