Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is cbiG [H]
Identifier: 226948222
GI number: 226948222
Start: 1139807
End: 1140928
Strand: Direct
Name: cbiG [H]
Synonym: CLM_1099
Alternate gene names: 226948222
Gene position: 1139807-1140928 (Clockwise)
Preceding gene: 226948221
Following gene: 226948223
Centisome position: 27.43
GC content: 26.38
Gene sequence:
>1122_bases ATGAATTTAGAAAAGGAATCTAGGATAATGAAAATATCTATAATTAATGTAACCAAGATGGGTAATGATATAGCCTATAA AATTAAAGAACATATGGATGCAGATTTATATTCAAAATATGTTACAAAAGAGTTAATAGCGGAAGCTAGCTTGGAATATA AACATTCACATTGTAAAGATAGTAATTTAAATTTATTAAATGACAAACATTATTTTAAAAAAGAAGATTTTAATTTTAAA GAAATAGTAAAAAAATCTTTTCAAGATTATGATGCAATAATATTTATAAGTTCTACCGGTATAGCAGTAAGAGCTATTGC ACCTTTTATACAAAGCAAAGATAAGGATCCAGCAGTTATTGTAATAGATAGTACAGGTAGATATGTCATAAGCCTTTTAA GTGGACATCTAGGTGGAGCCAATGAATTAACAGAAAAAATAGCTAAAGTGCTAGAGGCAGAACCTATAATAACCACAGCT ACAGATAATTTAAATATAAAAGCACCGGACATTATAGCTAAAGAGAATAATTTAGTAATAGAGGATTTGAAAAAGGCAAA GGATATAGCAGCATTACTTGTAAATGGAGAAAAAGTGGCCTTTGTAGATGAAGATAGGTTAGTGAATTTTCCTAAAGGCT ATACTTATGATATAGAAGATGCTAAAGGATTAGTTTTTGTAACAAATAAGTTACATATAGATGAAGATCTAAAAAATGAA AAATTAAATAAAAAGTGTATTTTAAAATTAATAAGAAAAAATATAGTTTTAGGTATTGGTTGTAGAAAAAATTATGATGA GATAACCATGAAAGAAAATGTAATAAAGGTTTTAAAAGAAGAAAATATAGATTTAAAAAGCATAAATTCTATAGTTTCCG TGGAAATAAAAAAAGATGAGAATGCAATAAAGGAGCTTTCAAAATTTTTAGGATGCCCCTTTATAACTTATAGCATAGAA GAAATAAAAAAAGTAGAACATAAATTTAAAGGTAGTGATTTTGTAAGAAAAACTATAGGCGTAGGGTCAGTTTGTGAACC CTCTATAGGATTAAAAGGTGCTAAAATAATTAAAGAAAAACAAAAATTAAATGGAATGACATTAGCTATAGGAAAACTAT AA
Upstream 100 bases:
>100_bases GTTAAAGATGCTAATATAACAAAAACAGCTCAAATATTAGTAGGGGATTTTATAGATTGTAAATATGACAAAAGCCTACT ATATGATGAGAAATTTACCC
Downstream 100 bases:
>100_bases CTTTTAGATTTATTTAAGTTATCATAAATAATTTAACAAATGTTAATATTCGCAATGAAATAAATCAGATAAAAATAATA GAGGGGAGGATTTTAGTGAG
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNLEKESRIMKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFK EIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDPAVIVIDSTGRYVISLLSGHLGGANELTEKIAKVLEAEPIITTA TDNLNIKAPDIIAKENNLVIEDLKKAKDIAALLVNGEKVAFVDEDRLVNFPKGYTYDIEDAKGLVFVTNKLHIDEDLKNE KLNKKCILKLIRKNIVLGIGCRKNYDEITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIE EIKKVEHKFKGSDFVRKTIGVGSVCEPSIGLKGAKIIKEKQKLNGMTLAIGKL
Sequences:
>Translated_373_residues MNLEKESRIMKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFK EIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDPAVIVIDSTGRYVISLLSGHLGGANELTEKIAKVLEAEPIITTA TDNLNIKAPDIIAKENNLVIEDLKKAKDIAALLVNGEKVAFVDEDRLVNFPKGYTYDIEDAKGLVFVTNKLHIDEDLKNE KLNKKCILKLIRKNIVLGIGCRKNYDEITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIE EIKKVEHKFKGSDFVRKTIGVGSVCEPSIGLKGAKIIKEKQKLNGMTLAIGKL >Mature_373_residues MNLEKESRIMKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFK EIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDPAVIVIDSTGRYVISLLSGHLGGANELTEKIAKVLEAEPIITTA TDNLNIKAPDIIAKENNLVIEDLKKAKDIAALLVNGEKVAFVDEDRLVNFPKGYTYDIEDAKGLVFVTNKLHIDEDLKNE KLNKKCILKLIRKNIVLGIGCRKNYDEITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIE EIKKVEHKFKGSDFVRKTIGVGSVCEPSIGLKGAKIIKEKQKLNGMTLAIGKL
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 41968; Mature: 41968
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEKESRIMKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKD CCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SNLNLLNDKHYFKKEDFNFKEIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDPAVI CCCCEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHCCCCCCEEE VIDSTGRYVISLLSGHLGGANELTEKIAKVLEAEPIITTATDNLNIKAPDIIAKENNLVI EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEECCCCCHH EDLKKAKDIAALLVNGEKVAFVDEDRLVNFPKGYTYDIEDAKGLVFVTNKLHIDEDLKNE HHHHHHHHHHHEEECCCEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEEECCCHHHHH KLNKKCILKLIRKNIVLGIGCRKNYDEITMKENVIKVLKEENIDLKSINSIVSVEIKKDE HCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCH NAIKELSKFLGCPFITYSIEEIKKVEHKFKGSDFVRKTIGVGSVCEPSIGLKGAKIIKEK HHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH QKLNGMTLAIGKL HHCCCEEEEECCC >Mature Secondary Structure MNLEKESRIMKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKD CCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SNLNLLNDKHYFKKEDFNFKEIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDPAVI CCCCEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHCCCCCCEEE VIDSTGRYVISLLSGHLGGANELTEKIAKVLEAEPIITTATDNLNIKAPDIIAKENNLVI EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEECCCCCHH EDLKKAKDIAALLVNGEKVAFVDEDRLVNFPKGYTYDIEDAKGLVFVTNKLHIDEDLKNE HHHHHHHHHHHEEECCCEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEEECCCHHHHH KLNKKCILKLIRKNIVLGIGCRKNYDEITMKENVIKVLKEENIDLKSINSIVSVEIKKDE HCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCH NAIKELSKFLGCPFITYSIEEIKKVEHKFKGSDFVRKTIGVGSVCEPSIGLKGAKIIKEK HHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH QKLNGMTLAIGKL HHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]