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The map label for this gene is bioY [H]

Identifier: 226948178

GI number: 226948178

Start: 1103380

End: 1103925

Strand: Direct

Name: bioY [H]

Synonym: CLM_1052

Alternate gene names: 226948178

Gene position: 1103380-1103925 (Clockwise)

Preceding gene: 226948177

Following gene: 226948179

Centisome position: 26.55

GC content: 30.04

Gene sequence:

>546_bases
ATGGCAAAAAAATTAGAAGTAAGAGATATGATATATTCAGCATTATTTGCAACTATTATAGGAGTTTCAAGTTATATTAC
TATTCCATTACCCATAAGTCCAGTACCTATAACAGCTCAAAGTTTAGCGGTTATGTTAGCAGGGTGTGTTTTAACTCCAA
TTCAAGTAGTTCTTAGTATGATAACTTTTTTATTAATGGGAGTTATAGGTATTCCAGTTTTTTCTGGAGGTAGAGCAGGA
ATTGGTATTATTGTAGGGAAAACTGGAGGTTATTTAATTGGATTTTTAATTGGAGCTATTATAATAAGTATTTTAGTACG
TAAAAATAAATCCTTATTTAATATGTTAATAGCTTGTTTTGTCGGAGGAATTGTAGTAGTACATATTTTAGGTTCAGCAT
GGCTTGGACAAGTTACTTCTATAGGAATAAAAAAAGCTTTTTTATTAGGGTCAGCACCTTTTATACCTGGAGATTTAATA
AAGGCCGTAGTAGCAGTTTTAATTGGAAGAAAGTTAAGTAAACAAATTAAAAAATCTACAACATAG

Upstream 100 bases:

>100_bases
TAAAACAGTTGACGATAAATTGCTTTTATAATATACTATTAATAATAAATTTTGAATGAGTGTAAGCATTTTGATAGTAT
TTATAGGAGTGATATAAAAT

Downstream 100 bases:

>100_bases
TAAAAGATATATATTTTTTTATATTAGATTTTATAATTATTTTCTACTAAATTAAAATAATCAAAGGATATTAGAACTAA
ATATAATACAATTTATTATA

Product: BioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAKKLEVRDMIYSALFATIIGVSSYITIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGVIGIPVFSGGRAG
IGIIVGKTGGYLIGFLIGAIIISILVRKNKSLFNMLIACFVGGIVVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLI
KAVVAVLIGRKLSKQIKKSTT

Sequences:

>Translated_181_residues
MAKKLEVRDMIYSALFATIIGVSSYITIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGVIGIPVFSGGRAG
IGIIVGKTGGYLIGFLIGAIIISILVRKNKSLFNMLIACFVGGIVVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLI
KAVVAVLIGRKLSKQIKKSTT
>Mature_180_residues
AKKLEVRDMIYSALFATIIGVSSYITIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSMITFLLMGVIGIPVFSGGRAGI
GIIVGKTGGYLIGFLIGAIIISILVRKNKSLFNMLIACFVGGIVVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIK
AVVAVLIGRKLSKQIKKSTT

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18906; Mature: 18774

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKLEVRDMIYSALFATIIGVSSYITIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSM
CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITFLLMGVIGIPVFSGGRAGIGIIVGKTGGYLIGFLIGAIIISILVRKNKSLFNMLIACF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGGIVVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIKAVVAVLIGRKLSKQIKKST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T
C
>Mature Secondary Structure 
AKKLEVRDMIYSALFATIIGVSSYITIPLPISPVPITAQSLAVMLAGCVLTPIQVVLSM
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITFLLMGVIGIPVFSGGRAGIGIIVGKTGGYLIGFLIGAIIISILVRKNKSLFNMLIACF
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGGIVVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIKAVVAVLIGRKLSKQIKKST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]