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The map label for this gene is sspH1 [H]

Identifier: 226948078

GI number: 226948078

Start: 999783

End: 999971

Strand: Reverse

Name: sspH1 [H]

Synonym: CLM_0939

Alternate gene names: 226948078

Gene position: 999971-999783 (Counterclockwise)

Preceding gene: 226948086

Following gene: 226948062

Centisome position: 24.07

GC content: 34.39

Gene sequence:

>189_bases
ATGGACGCGAGCAGAGCTTCTCAGTTAATTAATTCTAGAGAAACGGATGTTTATTGTAAAGGCCAACCTGTTATTATAAA
ATCTGTGGATGAATATTCTAAAATGGCTACAGTGGAAGGTTTAAATAGTGGTACCACTATAATAGCTCCTCTTAATGATA
TAAGAGAGAGCGGTGTTATAAATAAGTAA

Upstream 100 bases:

>100_bases
TATTATACAGAAATACAAATATAATGTCTACATATTTTATATATAAATGCAAAAACTAAAAATGAAGATTACAAAAATTA
GTGCTAAAGGAGTGAATAAA

Downstream 100 bases:

>100_bases
AATTTTTAATCTACACTAAATTAAGCACACTATGAAAAATAATATTGATGGTGTGCTTAATTTTATTTACCTTAAATAAA
CAGATTTCTAAGCTTCAGAG

Product: small acid-soluble spore protein, H-type

Products: NA

Alternate protein names: SASP H 1 [H]

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDASRASQLINSRETDVYCKGQPVIIKSVDEYSKMATVEGLNSGTTIIAPLNDIRESGVINK

Sequences:

>Translated_62_residues
MDASRASQLINSRETDVYCKGQPVIIKSVDEYSKMATVEGLNSGTTIIAPLNDIRESGVINK
>Mature_62_residues
MDASRASQLINSRETDVYCKGQPVIIKSVDEYSKMATVEGLNSGTTIIAPLNDIRESGVINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore core [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sspH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012610 [H]

Pfam domain/function: PF08141 SspH [H]

EC number: NA

Molecular weight: Translated: 6729; Mature: 6729

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASRASQLINSRETDVYCKGQPVIIKSVDEYSKMATVEGLNSGTTIIAPLNDIRESGVI
CCHHHHHHHHCCCCCCEEECCCCEEEECCHHHHHHHHHCCCCCCCEEEECCHHHHCCCCC
NK
CC
>Mature Secondary Structure
MDASRASQLINSRETDVYCKGQPVIIKSVDEYSKMATVEGLNSGTTIIAPLNDIRESGVI
CCHHHHHHHHCCCCCCEEECCCCEEEECCHHHHHHHHHCCCCCCCEEEECCHHHHCCCCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA