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The map label for this gene is 226948062

Identifier: 226948062

GI number: 226948062

Start: 980827

End: 981291

Strand: Reverse

Name: 226948062

Synonym: CLM_0923

Alternate gene names: NA

Gene position: 981291-980827 (Counterclockwise)

Preceding gene: 226948078

Following gene: 226948051

Centisome position: 23.62

GC content: 37.63

Gene sequence:

>465_bases
ATGACGAAATATGCAATAGTATTTTTTATGTCCATGGTTCCAATCGTAGAATTACGTGGGGCTATTCCATATTCACAGGC
TCTACACTTGCCTGTACTTCAATCTTTTATTGTTGCAATTATAGGAAATATGTTACCTATGCCTTTTATATACCTATTTG
CAAGGAAGGTGCTTGTATGGGGATCTGACAAACCCATTACTGGTAAATTCTTTACATGGTGTCTAGAAAAAGGTGAAAAG
GCTGGTAAAAAACTACAAGAAAAAACAGGCAAAAAAGGCCTATTTTGGGCACTACTAATATTCGTTGCAATTCCAGCTCC
TGGTACTGGTGCATGGACAGGCACCCTAGCAGCCAGCTTATTAGATATGGATTTTAAAACTAGTATTTTAGCTGTTATGC
TTGGAGTGTTAGTGGCAGGGATAATCATGGGTACTGCTAGTGTTGGTTTATTTAGCTTTTTTTAG

Upstream 100 bases:

>100_bases
TATTGATATTAACCTATTTGTACTTATTTATGATTTATGATATATTATTTCTAAAATTACTTATATATTTTTAACTAAAA
GAAAAGGTGGAGTTTATATA

Downstream 100 bases:

>100_bases
AATGAGACTTTTAAAAGGATGCCTCAAACTACATATGATTCTGGTATAAAAAGAGGCTTCCCTAAATAAAATAGATTTAA
TTTTAAATATAGCAAATATA

Product: putative transporter

Products: NA

Alternate protein names: Small Multi-Drug Export Protein; Small Multidrug Export Protein; Small Multidrug Export Protein QacE; Small Multi-Drug Exporter; Small-Multidrug Export Protein; PHP Domain-Containing Protein; Smr Small Multidrug Efflux Protein; Small Multi-Drug Export Family Transporter

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNMLPMPFIYLFARKVLVWGSDKPITGKFFTWCLEKGEK
AGKKLQEKTGKKGLFWALLIFVAIPAPGTGAWTGTLAASLLDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF

Sequences:

>Translated_154_residues
MTKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNMLPMPFIYLFARKVLVWGSDKPITGKFFTWCLEKGEK
AGKKLQEKTGKKGLFWALLIFVAIPAPGTGAWTGTLAASLLDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF
>Mature_153_residues
TKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNMLPMPFIYLFARKVLVWGSDKPITGKFFTWCLEKGEKA
GKKLQEKTGKKGLFWALLIFVAIPAPGTGAWTGTLAASLLDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF

Specific function: Unknown

COG id: COG2426

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16783; Mature: 16651

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNMLPMPFIYLFARKVLVW
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSDKPITGKFFTWCLEKGEKAGKKLQEKTGKKGLFWALLIFVAIPAPGTGAWTGTLAASL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNMLPMPFIYLFARKVLVW
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSDKPITGKFFTWCLEKGEKAGKKLQEKTGKKGLFWALLIFVAIPAPGTGAWTGTLAASL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA