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The map label for this gene is 226947370

Identifier: 226947370

GI number: 226947370

Start: 176642

End: 177130

Strand: Direct

Name: 226947370

Synonym: CLM_0190

Alternate gene names: NA

Gene position: 176642-177130 (Clockwise)

Preceding gene: 226947368

Following gene: 226947371

Centisome position: 4.25

GC content: 32.11

Gene sequence:

>489_bases
ATGGATAGAATAGATAAGAATAATTATTATTTAGATATATGTGAAACTGTTTTGGAAAGAGGCACATGTCTTAGAAGAAA
TTTTGCTGCTATAATAGTTAAGAATGATGAGATAATGGCAACAGGGTATACAGGAGCACCTAGAGGAAGAAAAAACTGTT
GTGATTTAGGATATTGTAAAAGGGAAGAGCTAAAAGTACCTCGAGGTACTAGATATGAACTGTGTAGGTCTGTTCATGCA
GAACAGAATGCTATTATATCTGCTAGAAGGCAAGACATGATAGCATCAACTATGTATTTAGTTGGTAAAGAATACAGTAC
TGGTAAATATGTAGTCAACACTGCCCCTTGTTCTCTTTGTAAAAGATTTATAATAAATTCTGGTATTGATAAAGTGGTCA
TAAGAGACTCAAAAGAAAAATTTAGAATTATACAAGTTGAAGAATGGATAGAAAATGATGATTCATTAAATGGTGATGGG
TCCTATTAA

Upstream 100 bases:

>100_bases
TTTAAAATGTTCTTAAATACTTTTAATTATTTGGGTTTTATTATAGAATAAAATAGAGTTATAGTTGAAATTTTATTTAT
ACTATATGATGGAGGGCTTA

Downstream 100 bases:

>100_bases
TTAAAAAATAAATTGATTTATAGCTCTTTTGTTTATCATAGCTGGCTTGGCATGGTTAATATTGATTAAATAATAAGTCC
TGTAATTAGATTAAGGAGAG

Product: cytidine/deoxycytidylate deaminase family protein

Products: dUMP; NH3

Alternate protein names: DCMP Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein; CMP/DCMP Deaminase; ComE Operon; Come Operon; Deaminase; Cytidine Deaminase; Cytidine/Deoxycytidylate Deaminase; Cytidine And Deoxycytidylate Deaminase Family Protein; Cytidine And Deoxycytidylate Deaminase

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHA
EQNAIISARRQDMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDG
SY

Sequences:

>Translated_162_residues
MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHA
EQNAIISARRQDMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDG
SY
>Mature_162_residues
MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHA
EQNAIISARRQDMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDG
SY

Specific function: Unknown

COG id: COG2131

COG function: function code F; Deoxycytidylate deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321938, Length=149, Percent_Identity=29.5302013422819, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.12

Molecular weight: Translated: 18553; Mature: 18553

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCK
CCCCCCCCEEHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCC
REELKVPRGTRYELCRSVHAEQNAIISARRQDMIASTMYLVGKEYSTGKYVVNTAPCSLC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH
KRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDGSY
HHHHHHCCCCEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCK
CCCCCCCCEEHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCC
REELKVPRGTRYELCRSVHAEQNAIISARRQDMIASTMYLVGKEYSTGKYVVNTAPCSLC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH
KRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDGSY
HHHHHHCCCCEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCMP; H2O

Specific reaction: dCMP + H2O = dUMP + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA