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The map label for this gene is rsmI [H]

Identifier: 226947287

GI number: 226947287

Start: 86759

End: 87613

Strand: Direct

Name: rsmI [H]

Synonym: CLM_0104

Alternate gene names: 226947287

Gene position: 86759-87613 (Clockwise)

Preceding gene: 226947286

Following gene: 226947288

Centisome position: 2.09

GC content: 25.38

Gene sequence:

>855_bases
ATGCTTAATATAGAGGAAGGAAAATTATATGTAGTTCCTACTCCTATAGGAAATTTAAGAGATATAACAATAAGAGCATT
AGATGTACTAGAAGATGTTGATATTATAGCAGCAGAGGATACAAGGCAAACTTTAAAATTATTAAATCATTTTAATATAA
AAAAAACATTAATAAGTTATCATAAATTTAATGAAGAAGATAAAAGTATAAATATAATAAATAATTTAAAAGAAGGTAAA
AAAATAGCATTAGTTTCTGATGCAGGGATGCCAGGAATATCGGACCCAGGATATGTACTTATAAAAAAATGTATAGAAGA
GCAAATAATATTTGAAGTTTTACCTGGAGCTACGGCATTTACTACAGCCTTAGTTTATTCTGGAATGGATACTACAAAGT
TTATTTTTAAGGGGTTTATACCAAGAGAAAATAAAAATAGACAAAAGTTAATACAGGATATAAAGGATAGGATGGAAACA
TTAATTTTTTATGAATCTCCCCATAGATTAAAGGAATGTTTAAAATTTTTAAGAGATTCCTTAGGAAACAGAAATATATC
TATATGTAGAGAACTTACTAAGCTACATGAAGAAATTATAAGAGATAGTTTAGAAGAGGTTATAAAATATTATGAAAATA
AGCAACCTAAAGGTGAATATGTTTTAGTTTTAGAAGGAAAATCTATAGAAGAAATAGAAAAAGAAAAGGAAATGGAATGG
TCTAGTATAAATATACAGGATCATATAAAAAAGTATATAAATGAAGGGTATAGTAAAAAAGAGTCTATAAAATTAGTAGC
TAAAGATAGAAAAATAACTAAGTCAGAAGTATATAAGTATTCTATAGATATATAA

Upstream 100 bases:

>100_bases
AAATGGGATAGACCTTTATATATTTATGATGAAAATAATAAATATACAAATGAAGTTAAAAGAATTTATGGAATGGAATA
AATAAAAAGGAGAGTATTAT

Downstream 100 bases:

>100_bases
ATAACAAATTAAATTAACATTTTTAAAAAAAATCCTTGTTAAAGTTGAGTTCTTTACTGAAATGGTGATATAATAGTTTT
ATGTTACAATCATAAAAGGG

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIINNLKEGK
KIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVLVLEGKSIEEIEKEKEMEW
SSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYSIDI

Sequences:

>Translated_284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIINNLKEGK
KIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVLVLEGKSIEEIEKEKEMEW
SSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYSIDI
>Mature_284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIINNLKEGK
KIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVLVLEGKSIEEIEKEKEMEW
SSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYSIDI

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=230, Percent_Identity=46.5217391304348, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32979; Mature: 32979

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISY
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHEECCHHHHHHHHHHHCCHHHHHHHH
HKFNEEDKSINIINNLKEGKKIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAF
HHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
TTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIFYESPHRLKECLKFLRDS
HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
LGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVLVLEGKSIEEIEKEKEMEW
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCH
SSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYSIDI
HCCCHHHHHHHHHHCCCCCHHHEEEEHHCCCCCHHHHEEEECCC
>Mature Secondary Structure
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISY
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHEECCHHHHHHHHHHHCCHHHHHHHH
HKFNEEDKSINIINNLKEGKKIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAF
HHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
TTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIFYESPHRLKECLKFLRDS
HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
LGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVLVLEGKSIEEIEKEKEMEW
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCH
SSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYSIDI
HCCCHHHHHHHHHHCCCCCHHHEEEEHHCCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]