Click here to switch to the map view.

The map label for this gene is yhaA [H]

Identifier: 226225367

GI number: 226225367

Start: 2868773

End: 2869963

Strand: Reverse

Name: yhaA [H]

Synonym: Lm4b_02790

Alternate gene names: 226225367

Gene position: 2869963-2868773 (Counterclockwise)

Preceding gene: 226225368

Following gene: 226225366

Centisome position: 98.53

GC content: 40.47

Gene sequence:

>1191_bases
ATGCGTACCAAGTTAATGAATATGCTTCAGGAACGAAAAGATGAAATCACTCAGATTAGACGTCATTTGCACGAACATCC
TGAATTATCGTTCCATGAAGCAGAAACCGCAAAGTTCATCCAAGATTTTTACAAAGGAAAAGACGTAGAAGTGGCAACCG
AAGTGGGAAATGGTCATGCGGTTGTTGTAACGATTAAAGGCGGGAAACCGGGGAAAACGATTGCGTTACGTGCCGATTTT
GATGCTCTTCCCATTGAAGAACAAACGGAATTACCATTTAAATCTAAAAAACCTGGCGTAATGCATGCATGTGGTCATGA
CGGACATACTGCTTATTTACTCGTTTTGGCAGATTGTTTAATCCAACTAAAAGAAAACATCCCTGGAACGATAAAAATTG
TTCATCAACATGCCGAAGAAACACCACCCGGCGGAGCGAAAAGTGTTGTCGAATCTGGTATTTTAGATGATGTGGATCAA
ATTTTTGGTATTCACGTATTTCCATTTGGTGAAAGCGGCCAAGTTTATTATCATAGTGGCTTCGCGATGGCTGGTCGCAC
ATATTTTAAACTTAAAATTCAAGGTGTTGGCGGGCATGGTTCGTCTCCACATATGGCGAATGATGCGATTGTCGCGGGTG
CTTATTTTGTGACGGCCATTCAAACAGTAGTGAGCCGCCGTTTGAACCCATTTGATACGGGCGTTATAACGATTGGTTCT
TTCGATGGTAAAGGTAGTTTTAACGTTATTAAAGATGCAGTGGAGCTAGAAGGCGATGTGCGTTATATGAATACTGAAAA
CTGTGATAAAATGGATGCAGAAATCCACCGTATTGTTACTGGTATGGAAGCGATGTTTGGTGTAACGGTGGAACTAACGT
ACACGAACGACTACCCACCACTTTACAACGATCCAGCTGTAACAGAACAAGTAGTTGCAAGTTTGCAAAAAGGTGTTGGC
GAGTACTTAACGGGCATTTCTGAATACGACATGCTTTCCGGATCAGAGGATTTTGCTTATTATTTACAAAAAATTCCTGG
AGTCTTCTTCTATATTGGCGCGAAACCGAAAAATACTTCGAATGCTTATTTTAATCATCATCCAAAATTTGATATAGATG
AAGATGCGTTGTTAGTTGCTGCCAAATCGGTTGCGGACGTGGTTTTAGATTATTATAAATTAAATGGATAA

Upstream 100 bases:

>100_bases
TTTTTGTGTCGTGTCACTTATTTCCGTTGCTATAACAACACCGTCTGCGAAAAAAGCGCTCGAATTAAAAGCCGCAAAAG
AATAGGAGGTTGGATTTATC

Downstream 100 bases:

>100_bases
TAGCTTTGAAAAGAGCATAGTCAGAAAAAGAATCTGGTTATGCTCTTTTGCAATTGGCGGGACTATAGAAGAGTGGAGTG
AATTCAAATGAATCAGGTAA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFYKGKDVEVATEVGNGHAVVVTIKGGKPGKTIALRADF
DALPIEEQTELPFKSKKPGVMHACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ
IFGIHVFPFGESGQVYYHSGFAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVTAIQTVVSRRLNPFDTGVITIGS
FDGKGSFNVIKDAVELEGDVRYMNTENCDKMDAEIHRIVTGMEAMFGVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVG
EYLTGISEYDMLSGSEDFAYYLQKIPGVFFYIGAKPKNTSNAYFNHHPKFDIDEDALLVAAKSVADVVLDYYKLNG

Sequences:

>Translated_396_residues
MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFYKGKDVEVATEVGNGHAVVVTIKGGKPGKTIALRADF
DALPIEEQTELPFKSKKPGVMHACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ
IFGIHVFPFGESGQVYYHSGFAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVTAIQTVVSRRLNPFDTGVITIGS
FDGKGSFNVIKDAVELEGDVRYMNTENCDKMDAEIHRIVTGMEAMFGVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVG
EYLTGISEYDMLSGSEDFAYYLQKIPGVFFYIGAKPKNTSNAYFNHHPKFDIDEDALLVAAKSVADVVLDYYKLNG
>Mature_396_residues
MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFYKGKDVEVATEVGNGHAVVVTIKGGKPGKTIALRADF
DALPIEEQTELPFKSKKPGVMHACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ
IFGIHVFPFGESGQVYYHSGFAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVTAIQTVVSRRLNPFDTGVITIGS
FDGKGSFNVIKDAVELEGDVRYMNTENCDKMDAEIHRIVTGMEAMFGVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVG
EYLTGISEYDMLSGSEDFAYYLQKIPGVFFYIGAKPKNTSNAYFNHHPKFDIDEDALLVAAKSVADVVLDYYKLNG

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=356, Percent_Identity=30.3370786516854, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 43631; Mature: 43631

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFYKGKDVEVATEVGNGHA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCE
VVVTIKGGKPGKTIALRADFDALPIEEQTELPFKSKKPGVMHACGHDGHTAYLLVLADCL
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
IQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQIFGIHVFPFGESGQVYYHSG
HHHHHCCCCEEEEEEHHHCCCCCCCHHHHHHHCCHHHHHHHHCEEEEEECCCCCEEEECC
FAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVTAIQTVVSRRLNPFDTGVITIGS
EEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
FDGKGSFNVIKDAVELEGDVRYMNTENCDKMDAEIHRIVTGMEAMFGVTVELTYTNDYPP
CCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC
LYNDPAVTEQVVASLQKGVGEYLTGISEYDMLSGSEDFAYYLQKIPGVFFYIGAKPKNTS
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCC
NAYFNHHPKFDIDEDALLVAAKSVADVVLDYYKLNG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFYKGKDVEVATEVGNGHA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCE
VVVTIKGGKPGKTIALRADFDALPIEEQTELPFKSKKPGVMHACGHDGHTAYLLVLADCL
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
IQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQIFGIHVFPFGESGQVYYHSG
HHHHHCCCCEEEEEEHHHCCCCCCCHHHHHHHCCHHHHHHHHCEEEEEECCCCCEEEECC
FAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVTAIQTVVSRRLNPFDTGVITIGS
EEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
FDGKGSFNVIKDAVELEGDVRYMNTENCDKMDAEIHRIVTGMEAMFGVTVELTYTNDYPP
CCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC
LYNDPAVTEQVVASLQKGVGEYLTGISEYDMLSGSEDFAYYLQKIPGVFFYIGAKPKNTS
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCC
NAYFNHHPKFDIDEDALLVAAKSVADVVLDYYKLNG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]