Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

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The map label for this gene is phnB [C]

Identifier: 226225275

GI number: 226225275

Start: 2769100

End: 2769543

Strand: Reverse

Name: phnB [C]

Synonym: Lm4b_02698

Alternate gene names: 226225275

Gene position: 2769543-2769100 (Counterclockwise)

Preceding gene: 226225276

Following gene: 226225272

Centisome position: 95.09

GC content: 39.86

Gene sequence:

>444_bases
ATGGCAAAAATGTACCCGTATTTGGCTTTTGAAAATGCAAAAGAGGCTTTAGGATATTATGAAGAAGTGTTCGGAGCAAC
GAATATTTCAAGGCTTCCAGTAAGTGAGGAACAAAGCGAAATGTTTGGCTTAGCAAAAGAAAACCTAGAGAACACAACTG
TTCACGGTGGCTTTACCGTCCTTGGCGCAAACTTATTTTGTTCAGATTCATTTGGCAAAGAAGTAAAACCATCCAATCAA
ATTTCGATTATGCTTGATTCTAACAGTGAAGACCCAGCGGCAGTAGCCGACGCCGATGCTTTCTTTGAAAAAGTGAGCAG
CTCAGAAAGAGTAACAGTAACGTTACCTTTCGAAGAGCAATTTTGGGGCGGAAAAATGGGACAATTCGTCGATGAGTACG
GAATTTCTTGGATGATTCATACGCAACCTTATTCTAAATTATAA

Upstream 100 bases:

>100_bases
CAAAACATGGCGCCGAATTTTTAAAAATCCCGAGATAGTTTAAGGTAAAACGAATTGGGTATTTTCTAACTAGTGTCTCA
AAAACAAAGGAGCGATTTTT

Downstream 100 bases:

>100_bases
AAAACAAGTGGACCAGATATTAGTTATCTTGGTCCACTTTTTTATTTGGATTCACTTTTTTCATTAAGTAATGTTCGCCG
ATGCCAGGAATGACAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase; PhnB Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGLAKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQ
ISIMLDSNSEDPAAVADADAFFEKVSSSERVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL

Sequences:

>Translated_147_residues
MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGLAKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQ
ISIMLDSNSEDPAAVADADAFFEKVSSSERVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL
>Mature_146_residues
AKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGLAKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQI
SIMLDSNSEDPAAVADADAFFEKVSSSERVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16365; Mature: 16234

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGLAKENLENTTVHGGFTV
CCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEE
LGANLFCSDSFGKEVKPSNQISIMLDSNSEDPAAVADADAFFEKVSSSERVTVTLPFEEQ
EECEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH
FWGGKMGQFVDEYGISWMIHTQPYSKL
HCCCCHHHHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure 
AKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGLAKENLENTTVHGGFTV
CCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEE
LGANLFCSDSFGKEVKPSNQISIMLDSNSEDPAAVADADAFFEKVSSSERVTVTLPFEEQ
EECEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH
FWGGKMGQFVDEYGISWMIHTQPYSKL
HCCCCHHHHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA