Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226225265

Identifier: 226225265

GI number: 226225265

Start: 2757407

End: 2758354

Strand: Reverse

Name: 226225265

Synonym: Lm4b_02688

Alternate gene names: NA

Gene position: 2758354-2757407 (Counterclockwise)

Preceding gene: 226225266

Following gene: 226225264

Centisome position: 94.7

GC content: 36.71

Gene sequence:

>948_bases
ATGAAAAAATTCCACGGGCTAGTGCTTACTGCGTTAGTAACTTGTCTAATCATTCCATTCTCATTGGCAGCAAGCGCTGA
AACAAATGAAAATGGTAACAATTCAACACCTACAGAAGAAAAAACAACAGATACTACTGAAAACATAATTACTGAAGAAA
AGCCAGAACCAGCAGTACCGACAAAAGACACGACTGTAACAACATCGCAAAAAAGCAAAGTTCAAACAACGATAGATATT
ACCGATTCTCAAGAAGTTTACTCGTATGAACAAAATAGTAAGATTGATCTCAAAGATTTCACCGCAACATTAACTGATTA
CACCGATACAAAACTAACCAATTATCGCTTAGCAGCCAATTCTAAACTAAGTACTGCACAAACAGGTATCCAAGAAGTCA
CGCTCCTTGGAGATAATGAAGACGGCAAAACAACAGCAGTCAAACTCAATTACTTAGTCAAAGAAAAAACGGCCCAACTG
ACTATTACAGATATGAATTTTGATTTAGAAACAAAAATTTTCACAGGTAAAACAAAACCATTCGCTAGTGTATATATGAG
TTCTCCGGCAGATGAAAACTTTGGAGAAGGAACAACAACTGCGGATAAAGATGGTTATTTTTATGCAGAATGGGCGACAA
CACCAAAACAAATTACGGCATATGCTTTTGATGAATCAGGTAATTATAGTGAAGAAGTAACCTATCAAGTCCCAGCGAAA
AAACAAAATGAAGCAGTCGTAACAGCTCCAGATAAAGTGAAGAAAATCGAAACAAAGAACGCGGTCAAAAGCGCAACAGC
AAAACCTGCTGATGTTACAAAAGTTACAAAAGATGACAAAACAGATTTGCCAAGCACAGGTGACAAAGGTACAGAATGGA
TTTTCGTGGTAGCGGGTGTTATAGTTATTCTTGTGGCAGTGTTATTACTTAGGAAACGTAAAAAATAA

Upstream 100 bases:

>100_bases
ATCGCAGTTTTAATATTTGTAACAATATTGTAATTTAAAATTGACTTTCATCACATTTCTGCTTATTATTAAACTAAGCA
AAATGAAAGGGGAATTTATT

Downstream 100 bases:

>100_bases
ACTAATTGCTATAGGGAATAACTCAAAAATAAGGAGCGAATAATGAAGAAGTTATTAAGCGGTTTAATTATTGTTTTAAT
GGTTAGCCTACTTGGTCACT

Product: Peptidoglycan anchored protein (LPXTG motif)

Products: NA

Alternate protein names: Pepdidoglycan Bound Protein; Peptidoglycan Anchored Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI
TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL
TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK
KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK

Sequences:

>Translated_315_residues
MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI
TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL
TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK
KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
>Mature_315_residues
MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI
TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL
TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK
KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34555; Mature: 34555

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
TKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAAN
CCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEHHHHHEECCCCCCCEEEEEEEECC
SKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKP
CCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC
FASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK
HHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGV
CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH
IVILVAVLLLRKRKK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
TKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAAN
CCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEHHHHHEECCCCCCCEEEEEEEECC
SKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKP
CCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC
FASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK
HHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGV
CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH
IVILVAVLLLRKRKK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA