| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yvyI [H]
Identifier: 226224716
GI number: 226224716
Start: 2190154
End: 2191110
Strand: Reverse
Name: yvyI [H]
Synonym: Lm4b_02132
Alternate gene names: 226224716
Gene position: 2191110-2190154 (Counterclockwise)
Preceding gene: 226224717
Following gene: 226224712
Centisome position: 75.23
GC content: 40.65
Gene sequence:
>957_bases ATGACAGAAGCATTATTTTTAAACCCTGTTTTTCAAGACCGAATTTGGGGTGGAACGAAATTACATGATTATTTTGGTTA CGATATCCCGTCTGATACTACTGGAGAAGACTGGGCGATTTCCGCTCATCCGAACGGTCCTTCGGTAATCAAAAACGGCG AATATAAAGGCAAAACATTAGCTGAATTATGGCAAGAAAATCCTGCACTTTTTGGTAATCCGAAAGAAGCCGTTTTCCCA CTATTAACGAAAATTTTGGATGCGAATACGGACCTTTCTGTACAAGTTCATCCAAATGACGAATATGCGAAAGTGCATGA AAACGGGGAACTTGGCAAAACAGAATGCTGGTATATTATTGACTGCGCTCCGGGTGCGGAATTAATATATGGACACAAAG CAGCTAGCAAAGAAGAATTCGCTACTTGGGCAAAAAACGGCGAATGGGATAAATTGCTTCGTAAAGTGGCGATTAAACCA GGTGAATTTTATTATGTTCCAAGTGGTACAATTCATGCGTTAGGCACGGGGACGTTAGTGCTTGAAACACAACAAAGCTC TGATACTACTTATCGTGTATATGACTATGACCGTAAAGACGCAGAAGGAAACTTGCGCGAACTTCATTTGGATAAAGCTA TTGACGTTACGACTGCACCGCATGTGGATGCGAAGTTAGATATTAAAACAGAAACACGTGGTGGGTTGACTGAAACTACT TTTGTATCGAATGATTTCTTTAGCGTATACAAATGGGAAGTGGACGGCGCGGCTGAATTCATGGCTAAAGCTCCTTATAC GTTAGTGAGTGTTTTAGACGGAGAAGCGGTACTTACGATTGATGGAACAAAACAATCGATTAAAAAAGGCGATCATTTTG TATTGCCGAATGATGTAAAATCTTGGGAAATTGATGGAAAAATGACGGCGATTGTTTCGAATCCGCCTGTGAAATAA
Upstream 100 bases:
>100_bases GGCTTTTTAGGCGGGAAATAACTAGCATCTTCGCCATTATTAGTATATACTTTTAATTGACAAAACCCAGCAAAAACGCT GGAATGGAGGTAATTTTATA
Downstream 100 bases:
>100_bases CAAATAAGCAGAAATCATTGTATAAAAGCCATTTTGAAAATGGAATATACAAGATTTCTGCTTCTTTATTGCTTTATGAA ATGACAACTAAAATATCATT
Product: mannnose-6 phospate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHPNGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFP LLTKILDANTDLSVQVHPNDEYAKVHENGELGKTECWYIIDCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKP GEFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTTAPHVDAKLDIKTETRGGLTETT FVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEAVLTIDGTKQSIKKGDHFVLPNDVKSWEIDGKMTAIVSNPPVK
Sequences:
>Translated_318_residues MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHPNGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFP LLTKILDANTDLSVQVHPNDEYAKVHENGELGKTECWYIIDCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKP GEFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTTAPHVDAKLDIKTETRGGLTETT FVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEAVLTIDGTKQSIKKGDHFVLPNDVKSWEIDGKMTAIVSNPPVK >Mature_317_residues TEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHPNGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFPL LTKILDANTDLSVQVHPNDEYAKVHENGELGKTECWYIIDCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKPG EFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTTAPHVDAKLDIKTETRGGLTETTF VSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEAVLTIDGTKQSIKKGDHFVLPNDVKSWEIDGKMTAIVSNPPVK
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 35337; Mature: 35206
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHPNGPSVIKNGEYKGKTL CCCEEEECCHHHHHCCCCCEEEHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCHH AELWQENPALFGNPKEAVFPLLTKILDANTDLSVQVHPNDEYAKVHENGELGKTECWYII HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEE DCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKPGEFYYVPSGTIHALGTGTLV ECCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCEEEEEECCEEE LETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTTAPHVDAKLDIKTETRGGLTETT EEECCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCEEEE FVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEAVLTIDGTKQSIKKGDHFVLPNDVK EECCCCEEEEEEEECCHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHCCCCEEECCCCC SWEIDGKMTAIVSNPPVK CEEECCEEEEEECCCCCC >Mature Secondary Structure TEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHPNGPSVIKNGEYKGKTL CCEEEECCHHHHHCCCCCEEEHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCHH AELWQENPALFGNPKEAVFPLLTKILDANTDLSVQVHPNDEYAKVHENGELGKTECWYII HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEE DCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKPGEFYYVPSGTIHALGTGTLV ECCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCEEEEEECCEEE LETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTTAPHVDAKLDIKTETRGGLTETT EEECCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCEEEE FVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEAVLTIDGTKQSIKKGDHFVLPNDVK EECCCCEEEEEEEECCHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHCCCCEEECCCCC SWEIDGKMTAIVSNPPVK CEEECCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934877; 7581999; 9384377 [H]